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The annotation and conditions in this rule are derived from the following entries: P00962 (SYQ_ECOLI)

If a protein meets these conditions... i

Common conditions

    • Matches HAMAP signature MF_00126
    • taxon = Bacteria
    • fragment ≠ the sequence is fragmented

Special conditions

    • Subsequence at position 269 - 271 aligns to "[MVL]-S-K" in entry P00962 (individually applies "ATP")
    • Subsequence at position 261 - 262 aligns to "R-L" in entry P00962 (individually applies "ATP")
    • Subsequence at position 231 - 231 aligns to "T" in entry P00962 (individually applies "ATP")
    • Subsequence at position 41 - 47 aligns to "H-[IL]-G-H-[AS]-K-[SA]" in entry P00962 (individually applies "ATP")
    • Subsequence at position 268 - 272 aligns to "[LVI]-[LMT]-S-K-R" in entry P00962 (individually applies "'KMSKS' region")
    • Subsequence at position 317 - 324 aligns to "T-K-Q-D-N-T-I-E" in entry P00962 (individually applies "Interaction with tRNA")
    • Subsequence at position 34 - 44 aligns to "P-[ED]-P-[NS]-G-[YF]-x-H-[LI]-G-H" in entry P00962 (individually applies "'HIGH' region")
    • Subsequence at position 35 - 37 aligns to "[ED]-P-N" in entry P00962 (individually applies "ATP")
    • Subsequence at position 67 - 67 aligns to "D" in entry P00962 (individually applies "L-glutamine")
    • Subsequence at position 212 - 212 aligns to "Y" in entry P00962 (individually applies "L-glutamine")

... then these annotations are applied i

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namei

  • Recommended name:
    Glutamine--tRNA ligase (EC:6.1.1.18)
    Alternative name(s):
    Glutaminyl-tRNA synthetase
    Short name:
    GlnRS

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namei

  • Name:glnS

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

  • Monomer.

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni

  • Interaction with tRNA (to residues corresponding to positions 317 - 324)

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei

  • ATP (to residues corresponding to position 231)
  • L-glutamine (to residues corresponding to position 67)
  • L-glutamine (to residues corresponding to position 212)

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi

  • ATP (to residues corresponding to positions 269 - 271)
  • ATP (to residues corresponding to positions 261 - 262)
  • ATP (to residues corresponding to positions 41 - 47)
  • ATP (to residues corresponding to positions 35 - 37)

<p>This subsection of the ‘Family and Domains’ section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi

  • 'KMSKS' region (to residues corresponding to positions 268 - 272)
  • 'HIGH' region (to residues corresponding to positions 34 - 44)

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO (Gene Ontology) termsi

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