Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

The annotation and conditions in this rule are derived from the following entries: Q57261 (TRUD_ECOLI)

If a protein meets these conditions... i

Common conditions

Special conditions

    • taxon = Enterobacterales
    • Subsequence at position 27 - 27 aligns to "F" in entry Q57261 (individually applies "Substrate")
    • Subsequence at position 129 - 129 aligns to "N" in entry Q57261 (individually applies "Substrate")
    • Subsequence at position 329 - 329 aligns to "F" in entry Q57261 (individually applies "Substrate")
    • Subsequence at position 80 - 80 aligns to "D" in entry Q57261

... then these annotations are applied i

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi

  • Recommended name:
    Probable tRNA pseudouridine synthase D (EC:5.4.99.27)
    Alternative name(s):
    tRNA-uridine isomerase D
    tRNA pseudouridylate synthase D
    tRNA pseudouridine(13) synthase
  • Recommended name:
    tRNA pseudouridine synthase D (EC:5.4.99.27)
    Alternative name(s):
    tRNA-uridine isomerase D
    tRNA pseudouridine(13) synthase
    tRNA pseudouridylate synthase D

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namei

  • Name:truD

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

<p>This section describes the function(s) of a protein.<p><a href='/help/function' target='_top'>More...</a></p>Functioni

  • Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
  • Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei

  • Substrate (to residues corresponding to position 27)
  • Substrate (to residues corresponding to position 129)
  • Substrate (to residues corresponding to position 329)

<p>This subsection of the ‘Function’ section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei

  • Nucleophile (to residues corresponding to position 80)

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO (Gene Ontology) termsi

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again