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Protein
Submitted name:

Lck-interacting transmembrane adapter 1

Gene

LIME1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Lck-interacting transmembrane adapter 1Imported
Gene namesi
Name:LIME1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

EuPathDBiHostDB:ENSG00000203896.9
HGNCiHGNC:26016 LIME1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000203896

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30Sequence analysisAdd BLAST30
ChainiPRO_500843277531 – 106Sequence analysisAdd BLAST76

Proteomic databases

PeptideAtlasiX6RKG5
PRIDEiX6RKG5

Expressioni

Gene expression databases

BgeeiENSG00000203896 Expressed in 87 organ(s), highest expression level in liver
ExpressionAtlasiX6RKG5 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliX6RKG5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J9JT Eukaryota
ENOG41114H9 LUCA
GeneTreeiENSGT00510000050080

Family and domain databases

InterProiView protein in InterPro
IPR026072 Lime1
PfamiView protein in Pfam
PF15332 LIME1, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

X6RKG5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGLPVSWAPP ALWVLGCCAL LLSLWALCTA CRRPEDAVAP RKRARRQRAR
60 70 80 90 100
LQGSATAAEA SLLRRTHLCS LSKSDTRLHE LHRGPRSSRA LRPASMDLLR

PHWLEV
Length:106
Mass (Da):11,856
Last modified:October 5, 2016 - v7
Checksum:i3D4DB006005CEDF7
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9H400LIME1_HUMAN
Lck-interacting transmembrane adapt...
LIME1 LIME, LP8067
295Annotation score:
A0A087WT39A0A087WT39_HUMAN
Lck-interacting transmembrane adapt...
LIME1
176Annotation score:
V9GYI1V9GYI1_HUMAN
Lck-interacting transmembrane adapt...
LIME1
131Annotation score:
A0A087WUJ1A0A087WUJ1_HUMAN
Lck-interacting transmembrane adapt...
LIME1
252Annotation score:
A0A087WZP9A0A087WZP9_HUMAN
Lck-interacting transmembrane adapt...
LIME1
211Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei106Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL121845 Genomic DNA No translation available.
KF510480 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000444951; ENSP00000414506; ENSG00000203896
UCSCiuc061yoy.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL121845 Genomic DNA No translation available.
KF510480 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliX6RKG5
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiX6RKG5
PRIDEiX6RKG5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000444951; ENSP00000414506; ENSG00000203896
UCSCiuc061yoy.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000203896.9
HGNCiHGNC:26016 LIME1
OpenTargetsiENSG00000203896
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410J9JT Eukaryota
ENOG41114H9 LUCA
GeneTreeiENSGT00510000050080

Gene expression databases

BgeeiENSG00000203896 Expressed in 87 organ(s), highest expression level in liver
ExpressionAtlasiX6RKG5 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR026072 Lime1
PfamiView protein in Pfam
PF15332 LIME1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiX6RKG5_HUMAN
AccessioniPrimary (citable) accession number: X6RKG5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 11, 2014
Last sequence update: October 5, 2016
Last modified: September 12, 2018
This is version 29 of the entry and version 7 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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