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Protein
Submitted name:

AraC family transcriptional regulator

Gene

ygiV

Organism
Escherichia coli
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
AraC family transcriptional regulatorImported
Submitted name:
GyrI-like small molecule binding domain proteinImported
Submitted name:
Putative regulatory proteinImported
Submitted name:
Putative transcriptional regulator YgiVImported
Submitted name:
Transcription activator effector binding proteinImported
Submitted name:
Transcriptional regulatorImported
Submitted name:
Transcriptional regulator, effector binding domain proteinImported
Submitted name:
Transcriptional repressor for mcbR biofilm proteinImported
Gene namesi
Name:ygiVImported
ORF Names:A8C65_08470Imported, A9R57_08115Imported, ACU57_05145Imported, AM266_09970Imported, AUQ13_02225Imported, BHS87_17095Imported, BJJ90_03625Imported, BK248_17645Imported, BMR12_03060Imported, BMT91_14665Imported, BUE81_02815Imported, BW690_03810Imported, BZL31_12665Imported, C4J69_19425Imported, C5N07_16855Imported, C6976_17645Imported, C9E25_10625Imported, CA268_25475Imported, CA593_11205Imported, CIJ94_22555Imported, CR534_03925Imported, CXB56_07335Imported, EC1094V2_628Imported, EC3234A_51c00780Imported, EL79_0683Imported, EL80_0675Imported, ERS085365_00343Imported, ERS085366_01707Imported, ERS085416_02287Imported, ERS139211_00693Imported, ERS150873_01635Imported, HMPREF3040_02130Imported, PGD_04093Imported, RK56_015520Imported, SK85_03337Imported, WR15_10490Imported, YDC107_1703Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000237650 Componenti: Unassembled WGS sequence
  • UP000184168 Componenti: Unassembled WGS sequence
  • UP000044893 Componenti: Unassembled WGS sequence
  • UP000236496 Componenti: Unassembled WGS sequence
  • UP000193530 Componenti: Unassembled WGS sequence
  • UP000030018 Componenti: Unassembled WGS sequence
  • UP000194908 Componenti: Unassembled WGS sequence
  • UP000238802 Componenti: Chromosome
  • UP000188724 Componenti: Unassembled WGS sequence
  • UP000070045 Componenti: Unassembled WGS sequence
  • UP000234324 Componenti: Chromosome
  • UP000037564 Componenti: Unassembled WGS sequence
  • UP000042305 Componenti: Unassembled WGS sequence
  • UP000040934 Componenti: Unassembled WGS sequence
  • UP000070450 Componenti: Unassembled WGS sequence
  • UP000185422 Componenti: Chromosome
  • UP000240478 Componenti: Unassembled WGS sequence
  • UP000036012 Componenti: Unassembled WGS sequence
  • UP000051850 Componenti: Unassembled WGS sequence
  • UP000238978 Componenti: Unassembled WGS sequence
  • UP000186204 Componenti: Unassembled WGS sequence
  • UP000050556 Componenti: Unassembled WGS sequence
  • UP000188855 Componenti: Unassembled WGS sequence
  • UP000233768 Componenti: Chromosome iv
  • UP000196822 Componenti: Unassembled WGS sequence
  • UP000029988 Componenti: Unassembled WGS sequence
  • UP000095183 Componenti: Unassembled WGS sequence
  • UP000077380 Componenti: Unassembled WGS sequence
  • UP000194199 Componenti: Chromosome
  • UP000041959 Componenti: Unassembled WGS sequence
  • UP000239287 Componenti: Unassembled WGS sequence
  • UP000194331 Componenti: Chromosome
  • UP000216687 Componenti: Unassembled WGS sequence
  • UP000045242 Componenti: Unassembled WGS sequence
  • UP000239654 Componenti: Chromosome
  • UP000225731 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 160AraC_E_bindInterPro annotationAdd BLAST155

Phylogenomic databases

eggNOGiENOG4105F4I Bacteria
COG3449 LUCA

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029442 GyrI-like
IPR011256 Reg_factor_effector_dom_sf
PfamiView protein in Pfam
PF06445 GyrI-like, 1 hit
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SUPFAMiSSF55136 SSF55136, 1 hit

Sequencei

Sequence statusi: Complete.

W8SUC2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNLTLDVNI IDFPSIPVAM LPHRCSPELL NYSVAKFIMW RKETGLSPVN
60 70 80 90 100
QSQTFGVAWD DPATTAPEAF RFDICGSVSE PIPDNRYGVS NGELTGGRYA
110 120 130 140 150
VARHVGELDD ISHTVWGIIR HWLPASGEKM RKAPILFHYT NLAEGVTEQR
160
LETDVYVPLA
Length:160
Mass (Da):17,827
Last modified:May 14, 2014 - v1
Checksum:iEEF5A02CBF2DCCF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP017631 Genomic DNA Translation: APT01173.1
CP021175 Genomic DNA Translation: ARR33632.1
CP021202 Genomic DNA Translation: ARR62470.1
CP024127 Genomic DNA Translation: AUK20394.1
CP025707 Genomic DNA Translation: AUO33908.1
CP027205 Genomic DNA Translation: AVM99832.1
HG976963 Genomic DNA Translation: CDU41092.1
CYAQ01000002 Genomic DNA Translation: CTR84833.1
CYAV01000014 Genomic DNA Translation: CTS71614.1
CYDH01000005 Genomic DNA Translation: CTV21025.1
CYCX01000016 Genomic DNA Translation: CTV94764.1
CYFX01000007 Genomic DNA Translation: CTZ28212.1
JPKL01000009 Genomic DNA Translation: KGM83672.1
JPMZ01000002 Genomic DNA Translation: KGM85603.1
LEUM01000019 Genomic DNA Translation: KLX94929.1
LGZN01000024 Genomic DNA Translation: KNF69831.1
LDYI01000041 Genomic DNA Translation: KPO16300.1
LIVE01000013 Genomic DNA Translation: KQJ16139.1
LSNZ01000077 Genomic DNA Translation: KXG99369.1
LOOZ01000005 Genomic DNA Translation: KXR93888.1
LCVH01000051 Genomic DNA Translation: OAC42988.1
LZEH01000113 Genomic DNA Translation: OEI65328.1
MOFD01000033 Genomic DNA Translation: OJK74052.1
MSEK01000019 Genomic DNA Translation: OLR88908.1
MTKH01000023 Genomic DNA Translation: ONG31247.1
MPAF01000025 Genomic DNA Translation: OOK27226.1
NAFT01000064 Genomic DNA Translation: ORT00925.1
MUAB01000022 Genomic DNA Translation: OUK51106.1
LYBG01000519 Genomic DNA Translation: OWD72239.1
NQIT01000090 Genomic DNA Translation: OZX91942.1
MOXU01000003 Genomic DNA Translation: PGG42004.1
JWSO02000013 Genomic DNA Translation: PNO96950.1
PSSV01000016 Genomic DNA Translation: PPI91044.1
PUJR01000017 Genomic DNA Translation: PQP08961.1
PVPD01000059 Genomic DNA Translation: PSG58018.1
PYRW01000014 Genomic DNA Translation: PSZ84368.1
LT883142 Genomic DNA Translation: SMZ43724.1
RefSeqiWP_000183505.1, NZ_QBRX01000003.1

Genome annotation databases

EnsemblBacteriaiAOT31257; AOT31257; FORC31_0791
CDU41092; CDU41092; PGD_04093
CTR84833; CTR84833; ERS085365_00343
CTS71614; CTS71614; ERS085366_01707
CTV21025; CTV21025; ERS139211_00693
CTV94764; CTV94764; ERS085416_02287
CTZ28212; CTZ28212; ERS150873_01635
KGM83672; KGM83672; EL80_0675
KGM85603; KGM85603; EL79_0683
KHH09560; KHH09560; PU69_08510
KIG75019; KIG75019; PU38_24670
KIH35128; KIH35128; PD07_15940
KLG80387; KLG80387; WR12_00665
KLX93413; KLX93413; SK83_00493
KLX94929; KLX94929; SK85_03337
KNF69831; KNF69831; WR15_10490
KPO16300; KPO16300; ACU57_05145
KQJ16139; KQJ16139; AM266_09970
KXG99369; KXG99369; HMPREF3040_02130
KXQ38548; KXQ38548; AUQ01_17145
KZJ62236; KZJ62236; AWG90_23490
OAC42988; OAC42988; EC3234A_51c00780
OAS85584; OAS85584; A6I92_18235
ODH22829; ODH22829; A6804_12635
ODH31785; ODH31785; A6803_05995
OEI65328; OEI65328; A9R57_08115
PATRICifig|562.10472.peg.4654

Similar proteinsi

Entry informationi

Entry nameiW8SUC2_ECOLX
AccessioniPrimary (citable) accession number: W8SUC2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 14, 2014
Last sequence update: May 14, 2014
Last modified: July 18, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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