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Protein

Cobalamin biosynthesis protein CobD

Gene

cobD

Organism
Micromonospora sp. M42
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.UniRule annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Pathwayi: adenosylcobalamin biosynthesis

This protein is involved in the pathway adenosylcobalamin biosynthesis, which is part of Cofactor biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway adenosylcobalamin biosynthesis and in Cofactor biosynthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processCobalamin biosynthesisUniRule annotation

Enzyme and pathway databases

UniPathwayi
UPA00148

Names & Taxonomyi

Protein namesi
Recommended name:
Cobalamin biosynthesis protein CobDUniRule annotation
Gene namesi
Name:cobDUniRule annotation
ORF Names:MCBG_05123Imported
OrganismiMicromonospora sp. M42Imported
Taxonomic identifieri457406 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeMicromonospora
Proteomesi
  • UP000030692 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei27 – 47HelicalUniRule annotationAdd BLAST21
Transmembranei263 – 281HelicalUniRule annotationAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the CobD/CbiB family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Family and domain databases

HAMAPiMF_00024 CobD_CbiB, 1 hit
InterProiView protein in InterPro
IPR004485 Cobalamin_biosynth_CobD/CbiB
PANTHERiPTHR34308 PTHR34308, 1 hit
PfamiView protein in Pfam
PF03186 CobD_Cbib, 1 hit

Sequencei

Sequence statusi: Complete.

W7W3Y9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASGGRLRPG GRRPGTALYR PDRSDGVAFT AVEVGAPVLL GAAVALVNRR
60 70 80 90 100
HPVARAALVA AGTWTVLGGR TLRHESRVMA RALGRADLPA ARARLGNLCG
110 120 130 140 150
RDPSALDESE LARATVESVA ENTSDAVVAP LVWGAVAGLP GLLGYRAANT
160 170 180 190 200
LDAMVGHRSP RYARFGTPAA RLDDALNLVP SRLTGLLTVA VAPAAHGDRA
210 220 230 240 250
VAWQVWRRDR ADHPSPNAGQ CEAAMAGALG VRLGGRNVYF GRAETRPFLG
260 270 280 290 300
DGPRPEARHL KRAARISGAV GVAALGLAAL YPVTVGRVAG AAGRAALGVL
310
MRAARRGSGR
Length:310
Mass (Da):32,025
Last modified:April 16, 2014 - v1
Checksum:i058C34E39A9FA7FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KK037233 Genomic DNA Translation: EWM67990.1

Genome annotation databases

EnsemblBacteriaiEWM67990; EWM67990; MCBG_05123

Similar proteinsi

Entry informationi

Entry nameiW7W3Y9_9ACTN
AccessioniPrimary (citable) accession number: W7W3Y9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: September 27, 2017
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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