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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Linkage group LG4

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei24 – 48HelicalSequence analysisAdd BLAST25
Transmembranei55 – 75HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini122 – 288PXAInterPro annotationAdd BLAST167
Domaini414 – 528RGSInterPro annotationAdd BLAST115
Domaini636 – 756PXInterPro annotationAdd BLAST121

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00800000124081
OMAiLSEDFWE
OrthoDBiEOG091G049K

Family and domain databases

CDDicd06878 PX_SNX25, 1 hit
Gene3Di3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR001683 Phox
IPR003114 Phox_assoc
IPR036871 PX_dom_sf
IPR016137 RGS
IPR036305 RGS_sf
IPR034905 SNX25
IPR037899 SNX25_PX
IPR013937 Sorting_nexin_C
PANTHERiPTHR22775:SF29 PTHR22775:SF29, 1 hit
PfamiView protein in Pfam
PF08628 Nexin_C, 1 hit
PF00787 PX, 1 hit
PF02194 PXA, 1 hit
PF00615 RGS, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SM00313 PXA, 1 hit
SM00315 RGS, 1 hit
SUPFAMiSSF48097 SSF48097, 1 hit
SSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit
PS51207 PXA, 1 hit
PS50132 RGS, 1 hit

Sequencei

Sequence statusi: Complete.

W5N8P0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHPDGSSSSS GGGSPDASPR PARLLLPGAA LGLAAAALVH SAGGGFVLTP
60 70 80 90 100
VLLRLLAYLS FALLCVSIGT VGMLVKQSRT GIVGTEPPKA RRTQLSGLFV
110 120 130 140 150
KIMGHFSGPV CESMQQRRAV ISHNVDKALK EVFDYSYRDY VLSWYVELSR
160 170 180 190 200
DEGQLYHMLS EDFWEIARQL RTRLAGIDVV SLVCNDTVKT LHAHFCDLKA
210 220 230 240 250
ANTRQEEPPG AFRLHPCLRS PEQELRFLRG CARLLMPCLL PRKDARAHSL
260 270 280 290 300
RVALAEVVAT KVLKPLVEAL SDPDYINRTL LAQLEHREQA TAHHKKAYTY
310 320 330 340 350
APSYEEFIKL ISSSSDVDFL KQLRYQIVVE IIQATTISSL PQLKKQKDSK
360 370 380 390 400
GKETAAMKAD LLRARNMKRY INQLTVAKKQ CEKRIRLLGG PAYDQPDDGA
410 420 430 440 450
SDENEEPQSQ RILQFEEIMS SAKYREHFRI YMERVDKRAL VSFWESVEYL
460 470 480 490 500
KNANKNEIPQ LVGEIYQNFF VESREIPVEK ALYKEIQQTL IGNKGTEVFG
510 520 530 540 550
KVQGDVYETM KERFYPSFLV SDVYDRLMRK EEERSSSQSS SEDKDEASQA
560 570 580 590 600
CESSEGALDD GSTGINEQAT YTASKLSQLH EKLEYKRQAL GSILNAPKPD
610 620 630 640 650
RKIVSRLKEE IGTMEREHSS LQLHLKRTDW WCENLGMWRA LIHSGEATEE
660 670 680 690 700
NGEQMPVYSV SVHLLEAGDS EKNRWTVCRR LSEFQMLHRK LSECFPSLKK
710 720 730 740 750
VQLPSVSKLP FKSVDQKFLE KSKNQLNTFL QKTLTDERLC QSEALYAFLS
760 770 780 790 800
PSPEHLKAVD SQGKKPSFSL ASFLERLPGD FFSHQEEEAE EDSDLSDYGE
810 820 830 840 850
EMDGKKDSLA EPCFMLIGEI FELRGMFKWV RKTLIALVQV TFGRTINKQI
860 870 880 890 900
RDTVNWIFSE QMLVYYINVF RDTFWPNGKL APPTAPRTES QRQETKERAQ
910
QKLLDNIPGS FSLRRAPV
Length:918
Mass (Da):104,328
Last modified:April 16, 2014 - v1
Checksum:iEBA5FE1073370F8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01002164 Genomic DNA No translation available.
AHAT01002165 Genomic DNA No translation available.
RefSeqiXP_006630165.1, XM_006630102.2

Genome annotation databases

EnsembliENSLOCT00000017029; ENSLOCP00000016999; ENSLOCG00000013780
GeneIDi102692194

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01002164 Genomic DNA No translation available.
AHAT01002165 Genomic DNA No translation available.
RefSeqiXP_006630165.1, XM_006630102.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSLOCT00000017029; ENSLOCP00000016999; ENSLOCG00000013780
GeneIDi102692194

Organism-specific databases

CTDi83891

Phylogenomic databases

GeneTreeiENSGT00800000124081
OMAiLSEDFWE
OrthoDBiEOG091G049K

Family and domain databases

CDDicd06878 PX_SNX25, 1 hit
Gene3Di3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR001683 Phox
IPR003114 Phox_assoc
IPR036871 PX_dom_sf
IPR016137 RGS
IPR036305 RGS_sf
IPR034905 SNX25
IPR037899 SNX25_PX
IPR013937 Sorting_nexin_C
PANTHERiPTHR22775:SF29 PTHR22775:SF29, 1 hit
PfamiView protein in Pfam
PF08628 Nexin_C, 1 hit
PF00787 PX, 1 hit
PF02194 PXA, 1 hit
PF00615 RGS, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SM00313 PXA, 1 hit
SM00315 RGS, 1 hit
SUPFAMiSSF48097 SSF48097, 1 hit
SSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit
PS51207 PXA, 1 hit
PS50132 RGS, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiW5N8P0_LEPOC
AccessioniPrimary (citable) accession number: W5N8P0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: November 7, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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