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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Linkage group LG15

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei380 – 398HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 111ACBInterPro annotationAdd BLAST90

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili324 – 344Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00840000129776
OMAiFHHFEPL

Family and domain databases

Gene3Di1.20.80.10, 1 hit
InterProiView protein in InterPro
IPR022408 Acyl-CoA-binding_prot_CS
IPR000582 Acyl-CoA-binding_protein
IPR035984 Acyl-CoA-binding_sf
IPR014352 FERM/acyl-CoA-bd_prot_sf
PfamiView protein in Pfam
PF00887 ACBP, 1 hit
PRINTSiPR00689 ACOABINDINGP
SUPFAMiSSF47027 SSF47027, 1 hit
PROSITEiView protein in PROSITE
PS00880 ACB_1, 1 hit
PS51228 ACB_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

W5N0M0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPLEGRGEAV PAGGMALADQ DCHRRFQTAV CVIQNLPKTG CYKPSYDVML
60 70 80 90 100
RLYGLYKQAT CGPCRLPRPG FWDPVGRYKW DSWKRLGNMS HSAAMTAYVD
110 120 130 140 150
EIKRVAQEVI DTMPVTEKTA ALFHYFKPLY HVIHDMPQLP EALQSLRAGL
160 170 180 190 200
ERTDTDSGAS LELSQELQSL GNGELRPAWD TVRTSGCQGE VSGKRITAGV
210 220 230 240 250
VLEGPRVSSD SEGEVFCDSL ERLDHDKCDQ WLNGLGSDHT PVAEATQMGL
260 270 280 290 300
GQGGERGQRM RRRGSPRAVR EGRREETRSR DRGDVPRAGR ALAGGAGAGG
310 320 330 340 350
RGGEEGGPGV GQGAAVQEHI ALALRRLQED MRHLLERLET LERLTPAQER
360 370 380 390 400
EPGWRPAARD VTPAEKGPWY GAFGVSGRTL LFLLLWPFLA QGLASLLWHR

HRKVRKAA
Length:408
Mass (Da):44,963
Last modified:April 16, 2014 - v1
Checksum:i14C5B1598F2E134D
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
W5N0L3W5N0L3_LEPOC
Uncharacterized protein
422Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01022977 Genomic DNA No translation available.
RefSeqiXP_015217453.1, XM_015361967.1
XP_015217454.1, XM_015361968.1
XP_015217455.1, XM_015361969.1

Genome annotation databases

EnsembliENSLOCT00000014208; ENSLOCP00000014179; ENSLOCG00000011535
GeneIDi102699102

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01022977 Genomic DNA No translation available.
RefSeqiXP_015217453.1, XM_015361967.1
XP_015217454.1, XM_015361968.1
XP_015217455.1, XM_015361969.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSLOCT00000014208; ENSLOCP00000014179; ENSLOCG00000011535
GeneIDi102699102

Organism-specific databases

CTDi79777

Phylogenomic databases

GeneTreeiENSGT00840000129776
OMAiFHHFEPL

Family and domain databases

Gene3Di1.20.80.10, 1 hit
InterProiView protein in InterPro
IPR022408 Acyl-CoA-binding_prot_CS
IPR000582 Acyl-CoA-binding_protein
IPR035984 Acyl-CoA-binding_sf
IPR014352 FERM/acyl-CoA-bd_prot_sf
PfamiView protein in Pfam
PF00887 ACBP, 1 hit
PRINTSiPR00689 ACOABINDINGP
SUPFAMiSSF47027 SSF47027, 1 hit
PROSITEiView protein in PROSITE
PS00880 ACB_1, 1 hit
PS51228 ACB_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiW5N0M0_LEPOC
AccessioniPrimary (citable) accession number: W5N0M0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: October 10, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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