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Protein
Submitted name:

Synaptic vesicle glycoprotein 2C

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Synaptic vesicle glycoprotein 2CImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Linkage group LG2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei155 – 178HelicalSequence analysisAdd BLAST24
Transmembranei190 – 210HelicalSequence analysisAdd BLAST21
Transmembranei222 – 245HelicalSequence analysisAdd BLAST24
Transmembranei251 – 268HelicalSequence analysisAdd BLAST18
Transmembranei280 – 302HelicalSequence analysisAdd BLAST23
Transmembranei322 – 341HelicalSequence analysisAdd BLAST20
Transmembranei437 – 455HelicalSequence analysisAdd BLAST19
Transmembranei581 – 604HelicalSequence analysisAdd BLAST24
Transmembranei611 – 630HelicalSequence analysisAdd BLAST20
Transmembranei636 – 658HelicalSequence analysisAdd BLAST23
Transmembranei670 – 693HelicalSequence analysisAdd BLAST24
Transmembranei699 – 719HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini155 – 723MFSInterPro annotationAdd BLAST569

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili20 – 40Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00550000074384
OMAiFMRCFNY
OrthoDBiEOG091G02NC

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR005828 MFS_sugar_transport-like
IPR036259 MFS_trans_sf
IPR005829 Sugar_transporter_CS
IPR022308 SV2
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
PF00083 Sugar_tr, 1 hit
SUPFAMiSSF103473 SSF103473, 3 hits
TIGRFAMsiTIGR01299 synapt_SV2, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit
PS00217 SUGAR_TRANSPORT_2, 1 hit

Sequencei

Sequence statusi: Complete.

W5ME58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDTYRDRTS LVKGAKDIAK EAKRQAVKKV SRAVDKAQDE YTQRSYSRFQ
60 70 80 90 100
DEEEDDDYYY RQDGNYSGAA NDEEGSSDAT EGHDEEDEIY EGEYQGIPTT
110 120 130 140 150
GQTKENQVAL GQPVPNEYKD RLELETERKA DEEELAQQYE LIIQECGHGR
160 170 180 190 200
FQWQLFFVLG MALMADGVEV FVVGFVLPSA ETDMCIPNSG SGWLGSIVYL
210 220 230 240 250
GMMVGAFFWG GLADKVGRRQ SLLICMSVNG FFAFLSSFVQ GYGFFLLCRS
260 270 280 290 300
ISGFGIGGAV PIVFSFFSEV LAREKRGEHL SWLCMFWMIG GIYASAMAWA
310 320 330 340 350
IIPHYGWSFS MGSAYQFHSW RVFVVVCALP CVSAVVALTF MPESPRFFLE
360 370 380 390 400
VGKHDEAWMI LKQIHDTNMR ARGQPEKVFT VNRIKTPKQI DELIEIQSGT
410 420 430 440 450
GNWFLRCVVR IRTEFYGIWL TFMRCFNYPV KDNTVKLAIV WFTLSFGYYG
460 470 480 490 500
LSVWFPDVIK HLQSDEYALK VRTFNTERVE NSTFNFTLEN QIHTNGEFIN
510 520 530 540 550
DRFNSMKFKS VTFINCTFQN CYFDNVTSLG TYFRSCVFIE NFFVNTDIDD
560 570 580 590 600
SKFINTETIN NTFHQNKTGC QMTFDDDYSA YWVYFVNFLG TLAVLPGNIV
610 620 630 640 650
SALLMDKIGR LTMLGGSMVL SGISCFFLWF GTSESMMIGM LCLYNGLTIS
660 670 680 690 700
AWNSLDVITV ELYPTDRRAT GFGFCNALCK LAAVLGNLIF GSLVGITKAI
710 720
PILLASTVLV CGGLVGLRLP DTRSNVLM
Length:728
Mass (Da):82,375
Last modified:April 16, 2014 - v1
Checksum:iC6BBA5FA9F171F4F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01014697 Genomic DNA No translation available.
AHAT01014698 Genomic DNA No translation available.
AHAT01014699 Genomic DNA No translation available.
AHAT01014700 Genomic DNA No translation available.
RefSeqiXP_006626776.1, XM_006626713.2

Genome annotation databases

EnsembliENSLOCT00000006675; ENSLOCP00000006667; ENSLOCG00000005520
GeneIDi102687613

Similar proteinsi

Entry informationi

Entry nameiW5ME58_LEPOC
AccessioniPrimary (citable) accession number: W5ME58
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: April 25, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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