Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi181 – 261HomeoboxPROSITE-ProRule annotationAdd BLAST81

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Linkage group LG20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini179 – 260HomeoboxInterPro annotationAdd BLAST82

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00920000149039
OMAiQSHVAQS
OrthoDBiEOG091G052F

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR039066 HNF-1
IPR006899 HNF-1_N
IPR023219 HNF1_dimer_N_dom_sf
IPR006897 HNF1b_C
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PANTHERiPTHR11568 PTHR11568, 1 hit
PfamiView protein in Pfam
PF04814 HNF-1_N, 1 hit
PF04812 HNF-1B_C, 1 hit
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF100957 SSF100957, 1 hit
SSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

W5M4S3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAARLTGLQE QLVWALLGSG LSRDILIQAA EELEQAGGGL GAEAGDRGAV
60 70 80 90 100
EGEGDSSEEG EEEFAPPIFK ELESLSPEEA ARQRAEVEHL LQEDPWQVAK
110 120 130 140 150
LVRSYMQQHN LPQREVVDST GLNQSHLSQH LNKGTPMKSQ KRAALYTWYV
160 170 180 190 200
RKQGEITQQF SNASRGLLVG EEPEEPGSRR QRRNRFKWGP ASQQILFQAY
210 220 230 240 250
ERQKNPSKEE RESLVEECNR AECLQRGVSP SQLAGLGSNL VTEVRVYNWF
260 270 280 290 300
ANRRKEEAFR HKLALDSSYP GHSASGTAPG GTDSPSHGVK YSQPTANQNM
310 320 330 340 350
ASSGDHHGDK SMGGRLEVSH ALLEAPCRPV SVSTAGAGAG GGSGGGMLPP
360 370 380 390 400
VSTLTALHGL SPSSPTPAQG LIMASLPSVV SLGPGESSLL IGLASTQPQT
410 420 430 440 450
VINSVGGGLT TLQPIPFQQQ IHTSHQQPIM QQFPSHMGPG SFMATMAQLS
460 470 480 490 500
PHVYGHKPEL PQYPNSSLFP QAMVITDTSG IGTLASLTAV KQILTMDPES
510
QSDPAVHMVS QQD
Length:513
Mass (Da):55,046
Last modified:April 16, 2014 - v1
Checksum:iE39D372CBCB408B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01038912 Genomic DNA No translation available.
AHAT01038913 Genomic DNA No translation available.
AHAT01038914 Genomic DNA No translation available.
AHAT01038915 Genomic DNA No translation available.
RefSeqiXP_015221431.1, XM_015365945.1

Genome annotation databases

EnsembliENSLOCT00000003388; ENSLOCP00000003381; ENSLOCG00000002874
GeneIDi102696287

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01038912 Genomic DNA No translation available.
AHAT01038913 Genomic DNA No translation available.
AHAT01038914 Genomic DNA No translation available.
AHAT01038915 Genomic DNA No translation available.
RefSeqiXP_015221431.1, XM_015365945.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSLOCT00000003388; ENSLOCP00000003381; ENSLOCG00000002874
GeneIDi102696287

Organism-specific databases

CTDi6927

Phylogenomic databases

GeneTreeiENSGT00920000149039
OMAiQSHVAQS
OrthoDBiEOG091G052F

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR039066 HNF-1
IPR006899 HNF-1_N
IPR023219 HNF1_dimer_N_dom_sf
IPR006897 HNF1b_C
IPR009057 Homeobox-like_sf
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PANTHERiPTHR11568 PTHR11568, 1 hit
PfamiView protein in Pfam
PF04814 HNF-1_N, 1 hit
PF04812 HNF-1B_C, 1 hit
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF100957 SSF100957, 1 hit
SSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50071 HOMEOBOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiW5M4S3_LEPOC
AccessioniPrimary (citable) accession number: W5M4S3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: October 10, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again