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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiAstyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)Imported
Taxonomic identifieri7994 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCharaciformesCharacoideiCharacidaeCharacidae incertae sedisAstyanax cladeAstyanax
Proteomesi
  • UP000018467 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini225 – 326BENInterPro annotationAdd BLAST102
Domaini373 – 478BENInterPro annotationAdd BLAST106
Domaini538 – 639BENInterPro annotationAdd BLAST102
Domaini710 – 811BENInterPro annotationAdd BLAST102

Phylogenomic databases

GeneTreeiENSGT00390000010827
OMAiPPRDDCY
OrthoDBiEOG091G025S

Family and domain databases

InterProiView protein in InterPro
IPR018379 BEN_domain
IPR033583 BEND3
PANTHERiPTHR28665 PTHR28665, 1 hit
PfamiView protein in Pfam
PF10523 BEN, 3 hits
SMARTiView protein in SMART
SM01025 BEN, 4 hits
PROSITEiView protein in PROSITE
PS51457 BEN, 4 hits

Sequencei

Sequence statusi: Complete.

W5LPN9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSLEHGVNT DGTGSDKEVK VEKDAEVSIE KTQSLEGRSS DCFTRRFAKR
60 70 80 90 100
SAPHISLDGL NTEQYRSTCR KRAKTVDHLQ DGGSNDTSRS LGLRSSSQER
110 120 130 140 150
TILSYRKPLY SISHRISEKK AASSLDQQGQ HETGVRVSHN GIIFPKLGST
160 170 180 190 200
EEHSRFESTS VAESTASPVS SESNLYPLFE KMFFILNTLN SSMTQLHSKV
210 220 230 240 250
DLLSLEVTRI KKQIKPSEMS MEFQPPPEYL LTSEELAQLM EQTSTAGELG
260 270 280 290 300
CRLLVQLFPE LFTAKECAHG CKSCGVANKR TLDSLHLQLI RNYVEVCYPL
310 320 330 340 350
VKNGNVWQTE CLLQINDFFN RFWAQKDMES GQICGKQTPV VLGFDMVQNH
360 370 380 390 400
GCHFINEDGQ DERLSLDSEE NSNNGSHLGN AKSDGVFDSQ ETSEDPDDIT
410 420 430 440 450
SPEEFVVFLL NRLFPEVFED GRLPEGHSTV GQLIVGSDRL DVIRKYMEAN
460 470 480 490 500
FPDIPEDTWL QLCVQHMEEA LENAPTNGSN LDDNREDGYD SSCLPDDISV
510 520 530 540 550
VKISDLCDYE KPNRRSKKSW LEPVDFDQMD VPSPDFDVPQ EYLLTKEQLK
560 570 580 590 600
SIYNSSLSIG NFASRLLVLM FPELFTYENA RKHYNCSGSL GKKQLDPVRV
610 620 630 640 650
NLIRHYVQLL YPRAKIDRVW TLEFVGKLDE RCRRRDTEQR RTYQQHRKVS
660 670 680 690 700
TPDQEPDPRE FGTASQINPL NPDRLKEDFD VPSLPPEKSS KDFCKIPLED
710 720 730 740 750
LTVSAPDFPV PSAYLLSDAE VREIVQQSLS VGNFAARLLV RLFPELFTQE
760 770 780 790 800
NLRLQYNHSG ACNKKQLDPV RLRLIRHYVE AVYPVDKMEE VWHYECVPSI
810 820
DERCRRPNRK KCDILKKAKR SNSTVS
Length:826
Mass (Da):94,115
Last modified:April 16, 2014 - v1
Checksum:iFF8FCFE3CEA0EB8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01083743 Genomic DNA No translation available.
RefSeqiXP_007247594.1, XM_007247532.2
XP_007247595.1, XM_007247533.1

Genome annotation databases

EnsembliENSAMXT00000021847; ENSAMXP00000021847; ENSAMXG00000021225
GeneIDi103044928
KEGGiamex:103044928

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01083743 Genomic DNA No translation available.
RefSeqiXP_007247594.1, XM_007247532.2
XP_007247595.1, XM_007247533.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSAMXT00000021847; ENSAMXP00000021847; ENSAMXG00000021225
GeneIDi103044928
KEGGiamex:103044928

Organism-specific databases

CTDi57673

Phylogenomic databases

GeneTreeiENSGT00390000010827
OMAiPPRDDCY
OrthoDBiEOG091G025S

Family and domain databases

InterProiView protein in InterPro
IPR018379 BEN_domain
IPR033583 BEND3
PANTHERiPTHR28665 PTHR28665, 1 hit
PfamiView protein in Pfam
PF10523 BEN, 3 hits
SMARTiView protein in SMART
SM01025 BEN, 4 hits
PROSITEiView protein in PROSITE
PS51457 BEN, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiW5LPN9_ASTMX
AccessioniPrimary (citable) accession number: W5LPN9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: November 7, 2018
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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