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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiAstyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)Imported
Taxonomic identifieri7994 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCharaciformesCharacoideiCharacidaeCharacidae incertae sedisAstyanax cladeAstyanax
Proteomesi
  • UP000018467 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini80 – 200THUMPInterPro annotationAdd BLAST121

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili262 – 282Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063557
OMAiMKQFGWK
OrthoDBiEOG091G1D46

Family and domain databases

InterProiView protein in InterPro
IPR000241 RNA_methylase_dom
IPR029063 SAM-dependent_MTases
IPR004114 THUMP_dom
PfamiView protein in Pfam
PF02926 THUMP, 1 hit
PF01170 UPF0020, 1 hit
SMARTiView protein in SMART
SM00981 THUMP, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit
PROSITEiView protein in PROSITE
PS51165 THUMP, 1 hit

Sequencei

Sequence statusi: Complete.

W5KUX3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRGAGVSAGY YCTAGGGMET FLLDEVKNKL KATEVEHIPG RVFFRCTSTL
60 70 80 90 100
QQLMLLKSAE RLFLLLRKAP PITLPKNPAK AADVIKQSIV GNRDVWSHTL
110 120 130 140 150
STWTSLQAEL NGPQGRGQKR KRDEGEKEEN SSESGQSRPT FRVSCRCSGA
160 170 180 190 200
IARCYNSQNL SRIIGVAISR QLGWKTDLRD PSIEVNVYLN DDHCVIGIPL
210 220 230 240 250
LKHPLASRSY MKHTGLRSTV AWAMVSLCAV QEGSVILDPM CGVGTILLEA
260 270 280 290 300
SQECPSAVCI GMDTETAQLQ KAAENIKAAG QDNRLMLAQS SCMAIPMPAS
310 320 330 340 350
SVDAVLCDVP FDRKFICSTD MTAALPHILA EMERVLRDGG HLVLLLSLQL
360 370 380 390 400
SARIRKLIKS SSSSHQSHTA DHDEESADST HTANTHTSDE KSSDTKSLKL
410 420 430
SSLVLQSTHR VSLGSTDALI HTYKKIHNTH
Length:430
Mass (Da):46,918
Last modified:April 16, 2014 - v1
Checksum:i116C6D1F7A4EE4FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01075274 Genomic DNA No translation available.
APWO01075275 Genomic DNA No translation available.
APWO01075276 Genomic DNA No translation available.
RefSeqiXP_007244657.1, XM_007244595.2

Genome annotation databases

EnsembliENSAMXT00000011385; ENSAMXP00000011385; ENSAMXG00000011080
GeneIDi103023795
KEGGiamex:103023795

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01075274 Genomic DNA No translation available.
APWO01075275 Genomic DNA No translation available.
APWO01075276 Genomic DNA No translation available.
RefSeqiXP_007244657.1, XM_007244595.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSAMXT00000011385; ENSAMXP00000011385; ENSAMXG00000011080
GeneIDi103023795
KEGGiamex:103023795

Organism-specific databases

CTDi80745

Phylogenomic databases

GeneTreeiENSGT00530000063557
OMAiMKQFGWK
OrthoDBiEOG091G1D46

Family and domain databases

InterProiView protein in InterPro
IPR000241 RNA_methylase_dom
IPR029063 SAM-dependent_MTases
IPR004114 THUMP_dom
PfamiView protein in Pfam
PF02926 THUMP, 1 hit
PF01170 UPF0020, 1 hit
SMARTiView protein in SMART
SM00981 THUMP, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit
PROSITEiView protein in PROSITE
PS51165 THUMP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiW5KUX3_ASTMX
AccessioniPrimary (citable) accession number: W5KUX3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: November 7, 2018
This is version 23 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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