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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Biological processi

Enzyme and pathway databases

UniPathwayi
UPA00143

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiAstyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)Imported
Taxonomic identifieri7994 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCharaciformesCharacoideiCharacidaeCharacidae incertae sedisAstyanax cladeAstyanax
Proteomesi
  • UP000018467 Componenti: Unassembled WGS sequence

Subcellular locationi

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 389WD_REPEATS_REGIONInterPro annotationAdd BLAST253
Repeati167 – 209WDPROSITE-ProRule annotationAdd BLAST43
Repeati211 – 252WDPROSITE-ProRule annotationAdd BLAST42
Repeati253 – 285WDPROSITE-ProRule annotationAdd BLAST33
Repeati315 – 349WDPROSITE-ProRule annotationAdd BLAST35
Repeati359 – 380WDPROSITE-ProRule annotationAdd BLAST22
Domaini387 – 423SOCS boxInterPro annotationAdd BLAST37

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00890000139406
KOiK10341
OMAiGHHNDVV
OrthoDBiEOG091G06GY

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR001496 SOCS_box
IPR036036 SOCS_box-like_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF07525 SOCS_box, 1 hit
PF00400 WD40, 5 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00253 SOCS, 1 hit
SM00969 SOCS_box, 1 hit
SM00320 WD40, 6 hits
SUPFAMiSSF158235 SSF158235, 1 hit
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50225 SOCS, 1 hit
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

W5KSZ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASFPDSINE NEIGKAKFIG ELLAPVAPFD QKSGRETWTV AFAPDGSYFA
60 70 80 90 100
WSQGHRIVRL VPWSKCIKNF SMRKEERING AGPRRLSRQG SDVALVPGEP
110 120 130 140 150
REHTIDCGDI VWGLAFGSSV PEKQSRCVNI EWHRFKFGQD QLLLATGLNN
160 170 180 190 200
GRIKIWDAYT GKLLLNLMDH TDIVRDLTFA PDGSLVLVSA SRDKTLRVWD
210 220 230 240 250
LKDDGNMVKV LRGHQNWVYC SAFSPDSSVL CSVGAGKSVF LWNMDKYTMI
260 270 280 290 300
RKLEGHHNDV VSCEFSPDGA LLATASYDTR VIVWDPHMGT VLLELGHLFP
310 320 330 340 350
PPSPIFAGGA NDRWVRSVAF CHDGQHIASI TDDRLVRFWS IDEKSPQAVA
360 370 380 390 400
SLTNGLCCAF STDGSVLAAG SRDGSVHFWS CPCSISSLQH LCRMALRRVL
410 420
TTQQVYTLTI PQCMQDYLAY RSL
Length:423
Mass (Da):47,072
Last modified:April 16, 2014 - v1
Checksum:i5C417CC266C29BD9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01033872 Genomic DNA No translation available.
RefSeqiXP_007236913.1, XM_007236851.2

Genome annotation databases

EnsembliENSAMXT00000010703; ENSAMXP00000010703; ENSAMXG00000010415
GeneIDi103046821
KEGGiamex:103046821

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
APWO01033872 Genomic DNA No translation available.
RefSeqiXP_007236913.1, XM_007236851.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSAMXT00000010703; ENSAMXP00000010703; ENSAMXG00000010415
GeneIDi103046821
KEGGiamex:103046821

Organism-specific databases

CTDi26118

Phylogenomic databases

GeneTreeiENSGT00890000139406
KOiK10341
OMAiGHHNDVV
OrthoDBiEOG091G06GY

Enzyme and pathway databases

UniPathwayi
UPA00143

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR001496 SOCS_box
IPR036036 SOCS_box-like_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF07525 SOCS_box, 1 hit
PF00400 WD40, 5 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00253 SOCS, 1 hit
SM00969 SOCS_box, 1 hit
SM00320 WD40, 6 hits
SUPFAMiSSF158235 SSF158235, 1 hit
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50225 SOCS, 1 hit
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiW5KSZ1_ASTMX
AccessioniPrimary (citable) accession number: W5KSZ1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: October 10, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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