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UniProtKB - W5CLF4 (W5CLF4_WHEAT)

Entry version 33 (02 Dec 2020)
Sequence version 1 (19 Mar 2014)
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Protein

X8 domain-containing protein

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
X8 domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTriticum aestivum (Wheat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4565 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Pooideae › Triticodae › Triticeae › Triticinae › Triticum
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000019116 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 34Sequence analysisAdd BLAST34
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501459467735 – 121X8 domain-containing proteinSequence analysisAdd BLAST87

Proteomic databases

PRoteomics IDEntifications database

More...PRIDEi		W5CLF4

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini37 – 120X8InterPro annotationAdd BLAST84

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysisARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG502S230, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_031666_5_0_1

Identification of Orthologs from Complete Genome Data

More...OMAi		HISICLI

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR012946, X8

Pfam protein domain database

More...Pfami		View protein in Pfam
PF07983, X8, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00768, X8, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

W5CLF4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MARGSQPSAS LLLFSLGLVL LCFTSGSTVR LAEAQKTWCM AKPSSDEKVL 
        60         70         80         90        100
QANINYACSN VSCAVIQPGG PCYNPNNLLS HTSVAMNLYY AANGRHSWNC 
       110        120 
YFADSGIVVK SDPSYGSCTY Y
Length:121
Mass (Da):13,020
Last modified:March 19, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5F5893CFF2542C7D
GO

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		TraesCS3A02G168200.1; TraesCS3A02G168200.1; TraesCS3A02G168200
TraesCS3D02G174300.1; TraesCS3D02G174300.1; TraesCS3D02G174300

Gramene; a comparative resource for plants

More...Gramenei		TraesCAD_scaffold_089101_01G000100.1; TraesCAD_scaffold_089101_01G000100.1; TraesCAD_scaffold_089101_01G000100
TraesCAD_scaffold_178829_01G000100.1; TraesCAD_scaffold_178829_01G000100.1; TraesCAD_scaffold_178829_01G000100
TraesCLE_scaffold_084643_01G000100.1; TraesCLE_scaffold_084643_01G000100.1; TraesCLE_scaffold_084643_01G000100
TraesCLE_scaffold_167775_01G000100.1; TraesCLE_scaffold_167775_01G000100.1; TraesCLE_scaffold_167775_01G000100
TraesCS3A02G168200.1; TraesCS3A02G168200.1; TraesCS3A02G168200
TraesCS3D02G174300.1; TraesCS3D02G174300.1; TraesCS3D02G174300
TraesPAR_scaffold_118653_01G000100.1; TraesPAR_scaffold_118653_01G000100.1; TraesPAR_scaffold_118653_01G000100
TraesPAR_scaffold_189122_01G000100.1; TraesPAR_scaffold_189122_01G000100.1; TraesPAR_scaffold_189122_01G000100
TraesROB_scaffold_097141_01G000100.1; TraesROB_scaffold_097141_01G000100.1; TraesROB_scaffold_097141_01G000100
TraesROB_scaffold_167999_01G000100.1; TraesROB_scaffold_167999_01G000100.1; TraesROB_scaffold_167999_01G000100
TraesWEE_scaffold_102356_01G000100.1; TraesWEE_scaffold_102356_01G000100.1; TraesWEE_scaffold_102356_01G000100
TraesWEE_scaffold_171044_01G000100.1; TraesWEE_scaffold_171044_01G000100.1; TraesWEE_scaffold_171044_01G000100

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Proteomic databases

PRIDEiW5CLF4

Genome annotation databases

EnsemblPlantsiTraesCS3A02G168200.1; TraesCS3A02G168200.1; TraesCS3A02G168200
TraesCS3D02G174300.1; TraesCS3D02G174300.1; TraesCS3D02G174300
GrameneiTraesCAD_scaffold_089101_01G000100.1; TraesCAD_scaffold_089101_01G000100.1; TraesCAD_scaffold_089101_01G000100
TraesCAD_scaffold_178829_01G000100.1; TraesCAD_scaffold_178829_01G000100.1; TraesCAD_scaffold_178829_01G000100
TraesCLE_scaffold_084643_01G000100.1; TraesCLE_scaffold_084643_01G000100.1; TraesCLE_scaffold_084643_01G000100
TraesCLE_scaffold_167775_01G000100.1; TraesCLE_scaffold_167775_01G000100.1; TraesCLE_scaffold_167775_01G000100
TraesCS3A02G168200.1; TraesCS3A02G168200.1; TraesCS3A02G168200
TraesCS3D02G174300.1; TraesCS3D02G174300.1; TraesCS3D02G174300
TraesPAR_scaffold_118653_01G000100.1; TraesPAR_scaffold_118653_01G000100.1; TraesPAR_scaffold_118653_01G000100
TraesPAR_scaffold_189122_01G000100.1; TraesPAR_scaffold_189122_01G000100.1; TraesPAR_scaffold_189122_01G000100
TraesROB_scaffold_097141_01G000100.1; TraesROB_scaffold_097141_01G000100.1; TraesROB_scaffold_097141_01G000100
TraesROB_scaffold_167999_01G000100.1; TraesROB_scaffold_167999_01G000100.1; TraesROB_scaffold_167999_01G000100
TraesWEE_scaffold_102356_01G000100.1; TraesWEE_scaffold_102356_01G000100.1; TraesWEE_scaffold_102356_01G000100
TraesWEE_scaffold_171044_01G000100.1; TraesWEE_scaffold_171044_01G000100.1; TraesWEE_scaffold_171044_01G000100

Phylogenomic databases

eggNOGiENOG502S230, Eukaryota
HOGENOMiCLU_031666_5_0_1
OMAiHISICLI

Family and domain databases

InterProiView protein in InterPro
IPR012946, X8
PfamiView protein in Pfam
PF07983, X8, 1 hit
SMARTiView protein in SMART
SM00768, X8, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiW5CLF4_WHEAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: W5CLF4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 19, 2014
Last sequence update: March 19, 2014
Last modified: December 2, 2020
This is version 33 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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