UniProtKB - W1NGC9 (W1NGC9_AMBTC)
Protein
AP2/ERF domain-containing protein
Gene
AMTR_s00010p00194910
Organism
Amborella trichopoda
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity Source: InterPro
- sequence-specific DNA binding Source: GO_Central
Keywordsi
Molecular function | DNA-bindingSAAS annotation |
Biological process | Transcription, Transcription regulationSAAS annotation |
Names & Taxonomyi
Protein namesi | Recommended name: AP2/ERF domain-containing proteinInterPro annotation |
Gene namesi | ORF Names:AMTR_s00010p00194910Imported |
Organismi | Amborella trichopodaImported |
Taxonomic identifieri | 13333 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Amborellales › Amborellaceae › Amborella |
Proteomesi |
|
Subcellular locationi
Keywords - Cellular componenti
NucleusSAAS annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 96 – 153 | AP2/ERFInterPro annotationAdd BLAST | 58 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 203 – 242 | DisorderedSequence analysisAdd BLAST | 40 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 203 – 231 | PolarSequence analysisAdd BLAST | 29 |
Phylogenomic databases
OMAi | IDWHGRN |
Family and domain databases
CDDi | cd00018 AP2, 1 hit |
Gene3Di | 3.30.730.10, 1 hit |
InterProi | View protein in InterPro IPR001471 AP2/ERF_dom IPR036955 AP2/ERF_dom_sf IPR016177 DNA-bd_dom_sf |
Pfami | View protein in Pfam PF00847 AP2, 1 hit |
PRINTSi | PR00367 ETHRSPELEMNT |
SMARTi | View protein in SMART SM00380 AP2, 1 hit |
SUPFAMi | SSF54171 SSF54171, 1 hit |
PROSITEi | View protein in PROSITE PS51032 AP2_ERF, 1 hit |
i Sequence
Sequence statusi: Complete.
W1NGC9-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVSQGVFVPE PAFLSMAHEH RTDIQPTLNP LQIQAQAHLQ WQQQQQQSIQ
60 70 80 90 100
FHHSHPQAHQ RLNPLAFLGP RAQPMKRMGA PRAMNHGSTG SKPAKLYRGV
110 120 130 140 150
RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDKAA YKLRGDYARL
160 170 180 190 200
NFPHLRHHLG FNGGNELGSL QSSVDAKLQA ICQGLVGSGQ VSVPSATGLV
210 220 230 240 250
KTEEVTSVVG SESEDSGEVA GNSSPSPDLS PDSGVKQPDF SGPPWDDLDA
260 270
YLLMKLPSLD QDLNWDLILS DV
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | KI397513 Genomic DNA Translation: ERM94200.1 |
Genome annotation databases
EnsemblPlantsi | ERM94200; ERM94200; AMTR_s00010p00194910 |
Gramenei | ERM94200; ERM94200; AMTR_s00010p00194910 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | KI397513 Genomic DNA Translation: ERM94200.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 13333.ERM94200 |
Genome annotation databases
EnsemblPlantsi | ERM94200; ERM94200; AMTR_s00010p00194910 |
Gramenei | ERM94200; ERM94200; AMTR_s00010p00194910 |
Phylogenomic databases
OMAi | IDWHGRN |
Family and domain databases
CDDi | cd00018 AP2, 1 hit |
Gene3Di | 3.30.730.10, 1 hit |
InterProi | View protein in InterPro IPR001471 AP2/ERF_dom IPR036955 AP2/ERF_dom_sf IPR016177 DNA-bd_dom_sf |
Pfami | View protein in Pfam PF00847 AP2, 1 hit |
PRINTSi | PR00367 ETHRSPELEMNT |
SMARTi | View protein in SMART SM00380 AP2, 1 hit |
SUPFAMi | SSF54171 SSF54171, 1 hit |
PROSITEi | View protein in PROSITE PS51032 AP2_ERF, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | W1NGC9_AMBTC | |
Accessioni | W1NGC9Primary (citable) accession number: W1NGC9 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 19, 2014 |
Last sequence update: | March 19, 2014 | |
Last modified: | October 16, 2019 | |
This is version 35 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |