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Entry version 58 (26 Feb 2020)
Sequence version 1 (19 Feb 2014)
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Protein
Submitted name:

TssK

Gene

tssK

Organism
Acinetobacter baumannii
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
TssKImported
Submitted name:
Type VI secretion protein, familyImported
Submitted name:
Type VI secretion system baseplate subunit TssKImported
Submitted name:
Type VI secretion system-associated proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:tssKImported
ORF Names:A7M90_06205Imported, CBI29_01458Imported, DVA79_16220Imported, E5294_12585Imported, EA685_02615Imported, EA746_015125Imported, EWO92_13695Imported, EWO96_13165Imported, EWP49_12640Imported, FJU36_12395Imported, FJU42_20250Imported, FQK04_09945Imported, LV38_02292Imported, SAMEA104305318_01407Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiAcinetobacter baumanniiImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri470 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeAcinetobacterAcinetobacter calcoaceticus/baumannii complex
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000315888 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000320356 Componenti: Unassembled WGS sequence
  • UP000179937 Componenti: Unassembled WGS sequence
  • UP000252694 Componenti: Unassembled WGS sequence
  • UP000292081 Componenti: Unassembled WGS sequence
  • UP000307835 Componenti: Unassembled WGS sequence
  • UP000320149 Componenti: Unassembled WGS sequence
  • UP000076314 Componenti: Unassembled WGS sequence
  • UP000280982 Componenti: Unassembled WGS sequence
  • UP000292122 Componenti: Unassembled WGS sequence
  • UP000271711 Componenti: Unassembled WGS sequence
  • UP000291489 Componenti: Unassembled WGS sequence
  • UP000197701 Componenti: Chromosome
  • UP000253255 Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili205 – 225Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4107NWW Bacteria
COG3522 LUCA

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR010263 VI_chp_4

The PANTHER Classification System

More...
PANTHERi
PTHR35566 PTHR35566, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05936 T6SS_VasE, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03353 VI_chp_4, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

V5VER9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFKAEKVLWG EGLFLRPQHF QIQDTYHEQR LNHTVRAVVP FSYGVQKLSF
60 70 80 90 100
DEAQLSTHIL ALESVEMIWQ DGEIYQAPAY DLLPEPILLD ELNLRGEMVI
110 120 130 140 150
YLALPLLQAN KQNLIDQNQS QKGRYQSHLV ETHDLFTNAT EADISLLRRR
160 170 180 190 200
AVFKLLDAHS NPDHNLDGFL YLPIGKIKRQ SSGAFEIDRK FIPPILHVDA
210 220 230 240 250
SETLVSNLKR TLNVIKAKIK TIQTNNRENE QKLIEFRSGD IVSFWLVNAL
260 270 280 290 300
NTAHAGLSHF LQYPQIHPER LFFELLRLAG SLLTFSTAYE VDQLPAYKHH
310 320 330 340 350
NLQESFTQLD TILRDLLDTI ISSRYISIAL KEIRPSYWVG SLETDKITRD
360 370 380 390 400
TRLYIAVSSS AMQTHELIQI VPLRFKIGST LDVEQRVVAA LPAIPLHHLI
410 420 430 440 450
QVPTAIPVRS GVSYFEIEPH HELYQRMLDS ETICIYVPAG FQDISIELIA

VMNA
Length:454
Mass (Da):51,991
Last modified:February 19, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iEC8F404271A10088
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KT334324 Genomic DNA Translation: ALD10097.1
CP021782 Genomic DNA Translation: ASF76837.1
LRDW01000020 Genomic DNA Translation: KZA24537.1
LYKI01000034 Genomic DNA Translation: OIG70655.1
QPHZ01000026 Genomic DNA Translation: RCU27856.1
RFDJ01000002 Genomic DNA Translation: RSR11981.1
SEUD01000008 Genomic DNA Translation: RYL15850.1
SEUE01000007 Genomic DNA Translation: RYL29051.1
SEUG01000005 Genomic DNA Translation: RYL43791.1
UFMQ01000004 Genomic DNA Translation: SST21256.1
SRZJ01000049 Genomic DNA Translation: TGZ05710.1
RFBA02000001 Genomic DNA Translation: THJ62610.1
VHGY01000097 Genomic DNA Translation: TPU59677.1
VHGX01000031 Genomic DNA Translation: TPU79291.1
VNWR01000043 Genomic DNA Translation: TWO46834.1

NCBI Reference Sequences

More...
RefSeqi
WP_000471444.1, NZ_WIVO01000050.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
BAP67169; BAP67169; IOMTU433_2391
KZA24537; KZA24537; LV38_02292

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|470.1314.peg.2035

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KT334324 Genomic DNA Translation: ALD10097.1
CP021782 Genomic DNA Translation: ASF76837.1
LRDW01000020 Genomic DNA Translation: KZA24537.1
LYKI01000034 Genomic DNA Translation: OIG70655.1
QPHZ01000026 Genomic DNA Translation: RCU27856.1
RFDJ01000002 Genomic DNA Translation: RSR11981.1
SEUD01000008 Genomic DNA Translation: RYL15850.1
SEUE01000007 Genomic DNA Translation: RYL29051.1
SEUG01000005 Genomic DNA Translation: RYL43791.1
UFMQ01000004 Genomic DNA Translation: SST21256.1
SRZJ01000049 Genomic DNA Translation: TGZ05710.1
RFBA02000001 Genomic DNA Translation: THJ62610.1
VHGY01000097 Genomic DNA Translation: TPU59677.1
VHGX01000031 Genomic DNA Translation: TPU79291.1
VNWR01000043 Genomic DNA Translation: TWO46834.1
RefSeqiWP_000471444.1, NZ_WIVO01000050.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiBAP67169; BAP67169; IOMTU433_2391
KZA24537; KZA24537; LV38_02292
PATRICifig|470.1314.peg.2035

Phylogenomic databases

eggNOGiENOG4107NWW Bacteria
COG3522 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR010263 VI_chp_4
PANTHERiPTHR35566 PTHR35566, 1 hit
PfamiView protein in Pfam
PF05936 T6SS_VasE, 1 hit
TIGRFAMsiTIGR03353 VI_chp_4, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiV5VER9_ACIBA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: V5VER9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 19, 2014
Last sequence update: February 19, 2014
Last modified: February 26, 2020
This is version 58 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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