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Protein
Submitted name:

Cholinergic receptor nicotinic gamma subunit

Gene

CHRNG

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIon channel, Ligand-gated ion channelSAAS annotation, ReceptorSAAS annotation
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Cholinergic receptor nicotinic gamma subunitImported
Gene namesi
Name:CHRNGImported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei238 – 260HelicalSequence analysisAdd BLAST23
Transmembranei272 – 292HelicalSequence analysisAdd BLAST21
Transmembranei304 – 327HelicalSequence analysisAdd BLAST24
Transmembranei469 – 491HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Cell junction, Cell membraneSAAS annotation, Membrane, Postsynaptic cell membraneSAAS annotation, Synapse

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500464596219 – 509Sequence analysisAdd BLAST491

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 237Neur_chan_LBDInterPro annotationAdd BLAST216
Domaini244 – 486Neur_chan_membInterPro annotationAdd BLAST243

Sequence similaritiesi

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00910000144023
KOiK04818
OMAiEEWFLVG
OrthoDBiEOG091G0R20

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
IPR002394 Nicotinic_acetylcholine_rcpt
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
PRINTSiPR00254 NICOTINICR
PR00252 NRIONCHANNEL
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit

Sequencei

Sequence statusi: Complete.

U3JZ73-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGHGLLLVL CTLAGVGCRN QEEKLFQDLM SNYNRNLRPA RGDEIIDVSL
60 70 80 90 100
KLTLTNLISL NEREETLTTN VWIEMQWIDY RLSWDPEKYD NIQLLRVPST
110 120 130 140 150
MVWLPDVVLE NNIDGTFEIT LYTNVLVSPD GSIYWLPPAI YRSVCVIHVT
160 170 180 190 200
YFPFDWQNCT MVFQSQTYSA NEINLLLTVE DGQTVEWIFI DPEAFTENGE
210 220 230 240 250
WAIKHRPARK IINSDHFTPD DIQYQQVIFY LIIQRKPLFY IINIIVPCVL
260 270 280 290 300
ISAMAVLVYF LPAKAGGQKC TVSINVLLAQ TVFLFLIAQK VPETSQAVPL
310 320 330 340 350
IGKYLTFLMV VTVVIVVNAV IVLNVSLRTP NTHSMSQRVR QVFLQLLPPY
360 370 380 390 400
LGMAMPEETP GPPQAIRRRS SLGLMVKADE YMLWKARTEL LFEKQKERDG
410 420 430 440 450
LMKTVLEKIG RGLESGSTQD FCQSLEEAGP DIRACVEACN YIANATREQN
460 470 480 490 500
DFGSESEEWM MVGQVIDRVC FFIMASLFVC GTIGIFLVAH FNQAPALPFP

GDPKQYLPE
Length:509
Mass (Da):57,929
Last modified:November 13, 2013 - v1
Checksum:iD501902A6C9062DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000170 Genomic DNA No translation available.
RefSeqiXP_005051233.1, XM_005051176.1

Genome annotation databases

EnsembliENSFALT00000008110; ENSFALP00000008077; ENSFALG00000007743
GeneIDi101816903
KEGGifab:101816903

Similar proteinsi

Entry informationi

Entry nameiU3JZ73_FICAL
AccessioniPrimary (citable) accession number: U3JZ73
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: May 23, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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