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Protein
Submitted name:

Uncharacterized protein

Gene

WSB1

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Biological processi

Enzyme and pathway databases

UniPathwayi
UPA00143

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:WSB1Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini143 – 389WD_REPEATS_REGIONInterPro annotationAdd BLAST247
Repeati167 – 209WDPROSITE-ProRule annotationAdd BLAST43
Repeati211 – 252WDPROSITE-ProRule annotationAdd BLAST42
Repeati253 – 294WDPROSITE-ProRule annotationAdd BLAST42
Repeati315 – 349WDPROSITE-ProRule annotationAdd BLAST35
Repeati360 – 379WDPROSITE-ProRule annotationAdd BLAST20
Domaini378 – 422SOCS boxInterPro annotationAdd BLAST45

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00890000139406
KOiK10341
OMAiGHHNDVV
OrthoDBiEOG091G06GY

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR001496 SOCS_box
IPR036036 SOCS_box-like_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF07525 SOCS_box, 1 hit
PF00400 WD40, 5 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00253 SOCS, 1 hit
SM00969 SOCS_box, 1 hit
SM00320 WD40, 6 hits
SUPFAMiSSF158235 SSF158235, 1 hit
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50225 SOCS, 1 hit
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

U3JQU4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLGSPVTDL LCPPARARTV GELLAPTSPF DKKCGRENWT VAFAPDGSYL
60 70 80 90 100
AWSQGHRVVK LVPWAQCLNN FLLHGTKNGA DAVGARPPRQ GSESSPKNKP
110 120 130 140 150
CEHVIDCGDI VWSLAFGSSV PEKQSRCVNI EWHRFKFGQE QLLLATGLNN
160 170 180 190 200
GRIKIWDVYT GKLLLNLMDH TEVVRDLTFA PDGSLILVSA SRDKTLRVWD
210 220 230 240 250
LKDDGNMMKV LRGHPNWVYG CAFSPDSSIL CSVGASKAVF LWDMDKYSML
260 270 280 290 300
RKLEGHHNDV VACEFSPDGA LLATASYDTQ VYVWDPHTGV ILREFGHLFP
310 320 330 340 350
PPTPIFAGGA NDRWVRAVSF SHDGLHVASL ADDKMVRFWR IDEEYPVQVA
360 370 380 390 400
PLNNGLCCTF STDGSVLAAG TQDGSVYFWA TPRQVSSLQH LCRMAIRRVM
410 420
PTSQVRNLPI PCKVLEFLCY QI
Length:422
Mass (Da):46,874
Last modified:November 13, 2013 - v1
Checksum:i58B0378806688440
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000871 Genomic DNA No translation available.
RefSeqiXP_005056639.1, XM_005056582.2

Genome annotation databases

EnsembliENSFALT00000005173; ENSFALP00000005148; ENSFALG00000004939
GeneIDi101818138
KEGGifab:101818138

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000871 Genomic DNA No translation available.
RefSeqiXP_005056639.1, XM_005056582.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSFALT00000005173; ENSFALP00000005148; ENSFALG00000004939
GeneIDi101818138
KEGGifab:101818138

Organism-specific databases

CTDi26118

Phylogenomic databases

GeneTreeiENSGT00890000139406
KOiK10341
OMAiGHHNDVV
OrthoDBiEOG091G06GY

Enzyme and pathway databases

UniPathwayi
UPA00143

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR001496 SOCS_box
IPR036036 SOCS_box-like_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF07525 SOCS_box, 1 hit
PF00400 WD40, 5 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00253 SOCS, 1 hit
SM00969 SOCS_box, 1 hit
SM00320 WD40, 6 hits
SUPFAMiSSF158235 SSF158235, 1 hit
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50225 SOCS, 1 hit
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiU3JQU4_FICAL
AccessioniPrimary (citable) accession number: U3JQU4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: November 7, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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