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Protein
Submitted name:

Pentraxin 3

Gene

PTX3

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pentraxin 3Imported
Gene namesi
Name:PTX3Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500464478321 – 426Sequence analysisAdd BLAST406

Interactioni

GO - Molecular functioni

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili91 – 111Sequence analysisAdd BLAST21
Coiled coili117 – 137Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119128
OMAiCHIRGNI
OrthoDBiEOG091G0AHP

Family and domain databases

InterProiView protein in InterPro
IPR013320 ConA-like_dom_sf
IPR030476 Pentaxin_CS
IPR001759 Pentraxin-related
PfamiView protein in Pfam
PF00354 Pentaxin, 1 hit
PRINTSiPR00895 PENTAXIN
SMARTiView protein in SMART
SM00159 PTX, 1 hit
SUPFAMiSSF49899 SSF49899, 1 hit
PROSITEiView protein in PROSITE
PS00289 PTX_1, 1 hit
PS51828 PTX_2, 1 hit

Sequencei

Sequence statusi: Complete.

U3JQ89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLARELLSLL ALLCAPSASA SAVDEDDDYE LMYVNLDNEI EGPAPAAEEA
60 70 80 90 100
AACECQREHS KWDKLFIMLE NSQMKENMML QALDELPRLQ LQTLKAELSQ
110 120 130 140 150
LTTTLAGALA TVTSQVVAQV EQVLQRSREQ AEEARRLQEW EQGKLLEHVL
160 170 180 190 200
QLSHNVSARL GWLESAWRGR AEQQAQQTAL QDELGASRGD SPILTQVWRE
210 220 230 240 250
LQQTRAELKV SQQWAAQHLL PAGCETAILF PMRSRKIFGS VHPTSAMTLS
260 270 280 290 300
SFTACIWLKV TEALDKTIVF SYGTKFNPYE VQLYLSRDSA VLAVGSAQHK
310 320 330 340 350
LAARNVVIPG KWLHLCGTWS SENGSASLWA QGQLAASAWD VAGAHTIPAG
360 370 380 390 400
GILQLGQEKN GCCMGGGFDE ALAFSGKLTG FNLWDRVLSP AEVTAQSVGD
410 420
TCGSRGNVVG WGVTEVLPYG GAQFVS
Length:426
Mass (Da):46,429
Last modified:November 13, 2013 - v1
Checksum:i49DB7B9CBE872F32
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01011642 Genomic DNA No translation available.
RefSeqiXP_005051485.1, XM_005051428.2

Genome annotation databases

EnsembliENSFALT00000004967; ENSFALP00000004943; ENSFALG00000004748
GeneIDi101812582
KEGGifab:101812582

Similar proteinsi

Entry informationi

Entry nameiU3JQ89_FICAL
AccessioniPrimary (citable) accession number: U3JQ89
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: May 23, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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