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Entry version 38 (10 Apr 2019)
Sequence version 1 (13 Nov 2013)
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Protein
Submitted name:

BAH domain and coiled-coil-containing 1b

Gene

bahcc1b

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
BAH domain and coiled-coil-containing 1bImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:bahcc1bImported
Synonyms:bahcc1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000437 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 12

Organism-specific databases

Zebrafish Information Network genome database

More...
ZFINi
ZDB-GENE-100716-2 bahcc1b

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSDARG00000080009 Expressed in 17 organ(s), highest expression level in embryo

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
U3JAH0 baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
7955.ENSDARP00000127238

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2561 – 2682BAHInterPro annotationAdd BLAST122

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1486 – 1527Sequence analysisAdd BLAST42

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000160116

Identification of Orthologs from Complete Genome Data

More...
OMAi
SAMKNLM

Database of Orthologous Groups

More...
OrthoDBi
11077at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001025 BAH_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01426 BAH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00439 BAH, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51038 BAH, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

U3JAH0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEGRDFAPPP HLLAERGALV HRAASRITPA GHTTVQHPGH FQPGKYYPSH
60 70 80 90 100
IPMPPHSGSG LIGNSSASFM GTFLASSLGS PPSHPSGPPS SPSSPPYRSG
110 120 130 140 150
PHSTAPSQIW FPHSHEAPGY PRFSGSLAPT FLPMSPLDHH GNSSVLYGQH
160 170 180 190 200
RFYDTQKDFY LRSLPSQPHL LSANHSLPPL SRTAPAHPLD SCSREREPGS
210 220 230 240 250
TVSQKSSKET GVAERRVGPG GKEKEKSKQE SKQDRHHGPP TLHHHHQHHP
260 270 280 290 300
QHHPQGLEDD FRHKDDPKHL SSCLLSTKTQ NGSDPGAATR GSLPSCVGPG
310 320 330 340 350
ASSLGTGRQT SGDSHCCKEG VSGEMRISEP ASDCLRHSAM LGHAHPMPYS
360 370 380 390 400
MPPPLGLGSA VGGSWLHPNH PHHHHPHHPH AELFCPPPPA PLTMPTAQEK
410 420 430 440 450
SLGRDSEVTG PTFVPSVGPL GDKISGPFQL GNHHCRGVGG GMIAVGGSAG
460 470 480 490 500
KETKTPERSS SGSRAANLLP QNSCQRKSSQ QQHAYGKADK SPDWPPGPHL
510 520 530 540 550
RTNEVQHSQN QHTHSARSCS LDSSEESDAF RPSLPQGTKG GHQAKSSIYA
560 570 580 590 600
STPPFRDCSH SGPSNRASSE GKGATEVECT QKSSQRVARI RHQQHRASTG
610 620 630 640 650
GQGPEMEPNS TTQDKRKMDM ESASQGYGGN RTGTHPSWEV RGPQPRPDEE
660 670 680 690 700
PHKAYNSLGA ASQTSRVDQG PLPPLTAPQE ATLGPQGPES NAMRNLMKYS
710 720 730 740 750
SQQPLLFTQK SPFGGLGCLK QGAVAGERSE RNERSDKSGN GSSCALQEGK
760 770 780 790 800
QTLPPRRASS SGENERSERV GKDSGEAQGE GEVRQPPVGI AVAVARQREP
810 820 830 840 850
PCRLPDGHPT HSHHSRVMPS MKGIGHPMYP LEREMDEERK RVCEEQLGLS
860 870 880 890 900
PFDRERELLL RENKDRVEFA RIHPSSSCHG DLTSHLIVPG GSQLGTEPSA
910 920 930 940 950
HAHPTHHHWM PRTGSPSLWM GHSYGLSHAA LHQNLTPGFS TTMPSPLQPV
960 970 980 990 1000
LPLPQDPSAA LVVLPTEPVA HPATHHLDVM EQQGLWPPVY GARGPTSHMQ
1010 1020 1030 1040 1050
HPAVYSRSQF LRQQELYALQ QHQHQQHRAA QAMELAHRHS HSQRKPEDPP
1060 1070 1080 1090 1100
IDLVEGPSEP HAPKHTKPFS VGPSPKPPPS SSSPGGCASR LSPCCRSPAP
1110 1120 1130 1140 1150
RSHLKSTPCT PCPEPSPAVA APRSPALSPH STPHHLPKPA ESQDKRGEGQ
1160 1170 1180 1190 1200
PPQDYPQSLE PDLPPGYTYP AIAMGYKGGP SPQEVQLAEH ADLEAEQAEP
1210 1220 1230 1240 1250
AEPAPRPHPL SPKGEEPVCH TGVGSPIRIS KEIEDVEEEG GVIEEDGQVD
1260 1270 1280 1290 1300
EGQVDATLSQ TSLCPTSDTS VAEPFSDKAT AIPNSQTCGI VSPAPAEENN
1310 1320 1330 1340 1350
ERDMDLQVPM IAPLTTTQNL QSVEPTKHDL DRTVEDGCTP PTNSSTPPLS
1360 1370 1380 1390 1400
PCPVPSDLGN QYPGSCIWSL ELLIAAALCA TRDARMAMSV PVSGNAVAPN
1410 1420 1430 1440 1450
YGIELLSELA ELEQSQQQRN NTGENDDDML TFDLQSLATL AAARALELAP
1460 1470 1480 1490 1500
PIPADSTPPL RRILNLRKKC KWTPRSEPVC PVKATMETLD QEELAMRVRL
1510 1520 1530 1540 1550
AELQRRYKEK QRELAKLQRK HDHQKEETAR SPARRGPGRP RKRKSTSAPP
1560 1570 1580 1590 1600
IPTDAPKKVK SAGAGAGPGL MTAEDLAGGG DRKRKKKRMT GGPYHHLTST
1610 1620 1630 1640 1650
QMKAHCRPRG RPRLLSTKFK QKACSQLKQK AKAKRGSRLV NLLCHRESKT
1660 1670 1680 1690 1700
QSTVPEHQSA KEEHAHNNKT GEQGDTAGSG TAVQQDSDGK RSVMKRGARS
1710 1720 1730 1740 1750
KAILSSTPLP TRTQQLLCNT AMTDSKLEAT EKGISDTEEE DDGIYDSEEG
1760 1770 1780 1790 1800
AEGIKNLSSK EQLSGAGRPS QCSIVKLEAN QKAKNKTERQ GFGSMNVSVT
1810 1820 1830 1840 1850
KEEMKRRKAP CRPAQVCADH NHSELDEDRR LTGPKWREGS RENTFDHTRV
1860 1870 1880 1890 1900
LKTSPTPRER TTRKSAVLLG KRKSCWLQAL SSQYDDISWS RRIRNKQQAK
1910 1920 1930 1940 1950
GRAVSRLLES FAADEGFQID DDSSFSEGEE EEEEEEEEPE LMGSALPALP
1960 1970 1980 1990 2000
NCILTKEILR DGLKVLISKE DELLYAAYVH TLDLPDIYSV VVEGERGNRP
2010 2020 2030 2040 2050
RIYSLEQLLQ EAVLDVQPET VETLMAGTRV CAYWSERSRC LYPGYVRRGG
2060 2070 2080 2090 2100
PGEEQKEGSV MVEFDDGDRG WISLSSIRCL PPGYQVHCAE PSPAHLISPS
2110 2120 2130 2140 2150
CRRRKTSTQE KITQQADASN ERSSNTEPRK SAVKAKPGRP KSVNASSKSG
2160 2170 2180 2190 2200
ASENVTETAS PLLSWPVATM SRRKPSMDLF QFNGLTKKAL KGKESDMFPL
2210 2220 2230 2240 2250
LSSTMTTPAK GIFSTSFEVD SFSSIANGCT SFGNQQLAPG LPPSHKVVPG
2260 2270 2280 2290 2300
SRCRKIGDRK EFLVKLDHEG VTSPKTKNGK ALLLLGNPEL QRSGRMEKGF
2310 2320 2330 2340 2350
GAKGIGELTS TMGYSQSVLL VKDAKRNSCH LLKGSSDMRK HPQGLGLSEY
2360 2370 2380 2390 2400
TDYGPNCHSD CLSSYSDMDE DEDEEEDARR AAMRTTGRFL SRLSVSSSSS
2410 2420 2430 2440 2450
GSSSASSSGS LSSSSVCSSD NDSSYSSDEE EASRLLLQGC LSSHHTLLQQ
2460 2470 2480 2490 2500
QQHSDPPTAP PRHTFGAKTM SISNSKAAVN SSTGKPPKRK EIANSSSVVQ
2510 2520 2530 2540 2550
SKSSKDFPKK QKMQSSEGPP NSSAFMPGRQ LWRWSGNPTQ RRGLKGKARK
2560 2570 2580 2590 2600
LFYKAIVRGK DTVRVGDCAV FLSAGRPHLP FIGRIESLWE SWSSNMVVKV
2610 2620 2630 2640 2650
KWFYHPEETK LGKRHRDGKH ALYQSSHEDE NDVQTISHKC QVVSRAEYER
2660 2670 2680
LSRIRKPNSN GQDLYYLAGT YDPTSGQLVT AEGESIIC
Length:2,688
Mass (Da):292,536
Last modified:November 13, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF6018284DAED3AD5
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
U3JB23U3JB23_DANRE
BAH domain and coiled-coil-containi...
bahcc1b bahcc1
116Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
U3JAG8U3JAG8_DANRE
BAH domain and coiled-coil-containi...
bahcc1b bahcc1
57Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
U3JAD4U3JAD4_DANRE
BAH domain and coiled-coil-containi...
bahcc1b bahcc1
43Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CR854979 Genomic DNA No translation available.
CR932362 Genomic DNA No translation available.
CU459169 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
XP_009305095.1, XM_009306820.2
XP_009305096.1, XM_009306821.2

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Dr.157766

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSDART00000152876; ENSDARP00000127238; ENSDARG00000080009
ENSDART00000180807; ENSDARP00000147391; ENSDARG00000080009

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
794333

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
dre:794333

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR854979 Genomic DNA No translation available.
CR932362 Genomic DNA No translation available.
CU459169 Genomic DNA No translation available.
RefSeqiXP_009305095.1, XM_009306820.2
XP_009305096.1, XM_009306821.2
UniGeneiDr.157766

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000127238

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000152876; ENSDARP00000127238; ENSDARG00000080009
ENSDART00000180807; ENSDARP00000147391; ENSDARG00000080009
GeneIDi794333
KEGGidre:794333

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
794333
ZFINiZDB-GENE-100716-2 bahcc1b

Phylogenomic databases

GeneTreeiENSGT00940000160116
OMAiSAMKNLM
OrthoDBi11077at2759

Gene expression databases

BgeeiENSDARG00000080009 Expressed in 17 organ(s), highest expression level in embryo
ExpressionAtlasiU3JAH0 baseline

Family and domain databases

InterProiView protein in InterPro
IPR001025 BAH_dom
PfamiView protein in Pfam
PF01426 BAH, 1 hit
SMARTiView protein in SMART
SM00439 BAH, 1 hit
PROSITEiView protein in PROSITE
PS51038 BAH, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiU3JAH0_DANRE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: U3JAH0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: April 10, 2019
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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