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Protein

Nucleolar GTP-binding protein 1

Gene

GTPBP4

Organism
Callithrix jacchus (White-tufted-ear marmoset)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Involved in the biogenesis of the 60S ribosomal subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processRibosome biogenesisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleolar GTP-binding protein 1UniRule annotation
Gene namesi
Name:GTPBP4Imported
OrganismiCallithrix jacchus (White-tufted-ear marmoset)Imported
Taxonomic identifieri9483 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCallitrichinaeCallithrixCallithrix
Proteomesi
  • UP000008225 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi9483.ENSCJAP00000015718

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini169 – 340OBG-type GInterPro annotationAdd BLAST172

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili588 – 608Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1490 Eukaryota
COG1084 LUCA
GeneTreeiENSGT00390000018475
OMAiSLYQCKQ
OrthoDBiEOG091G0476
TreeFamiTF300430

Family and domain databases

InterProiView protein in InterPro
IPR031167 G_OBG
IPR006073 GTP_binding_domain
IPR024926 NOG1
IPR010674 NOG1_Rossman_fold_dom
IPR012973 NOG_C
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
PANTHERiPTHR11702:SF4 PTHR11702:SF4, 1 hit
PfamiView protein in Pfam
PF06858 NOG1, 1 hit
PF08155 NOGCT, 1 hit
PIRSFiPIRSF038919 NOG1, 1 hit
PRINTSiPR00326 GTP1OBG
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51710 G_OBG, 1 hit

Sequencei

Sequence statusi: Complete.

U3FSH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHYNFKKIT VVPSAKDFID LTLSKTQRKT PTVIHKHYQI HRIRHFYMRK
60 70 80 90 100
VKFTQQNYHD RLSQILTDFP KLDDIHPFYA DLMNILYDKD HYKLALGQIN
110 120 130 140 150
IAKNLVDNVA KDYVRLMKYG DSLYRCKQLK RAALGRMCTV IKRQKQSLEY
160 170 180 190 200
LEQVRQHLSR LPTIDPNTRT LLLCGYPNVG KSSFINKVTR ADVDVQPYAF
210 220 230 240 250
TTKSLFVGHM DYKYLRWQVV DTPGILDHPL EDRNTIEMQA ITALAHLRAA
260 270 280 290 300
VLYVMDLSEQ CGHGLREQLE LFQNIRPLFI NKPLIVVANK CDVKRIAELS
310 320 330 340 350
EDDQKIFTNL QAEGFPVIET STLTEEGVIK VKTEACNRLL AHRVETKMKG
360 370 380 390 400
NKVNEVLNRL HLAVPTRRDD KERPPFIPEG VVARRKRMEM EEPKKKRERD
410 420 430 440 450
LELEMGDDYI LDLQKYWDLM NSSEKHDKIP EIWEGHNIAD YIDPAIMKKL
460 470 480 490 500
EELEKEEELR TAAGEYDSDS ESEDEEMLEI RQLAKQIREK KKLKILESKE
510 520 530 540 550
KNTQGPRMPR TAKKVQRTVL ENEMRSLGVD MDDKDNAHYA VQARRSRSVT
560 570 580 590 600
RKRKREDSAP PSSVARSRSR SCSRTPRDVS GLRDVKMVKK AKTMMKNAQK
610 620 630
KMNRLGKKGE ADRHVFDMKP KHLLSGKRKA GKKDRR
Length:636
Mass (Da):74,248
Last modified:November 13, 2013 - v1
Checksum:i624F23641FCDCCDF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GAMT01007767 mRNA Translation: JAB04094.1
GAMS01000092 mRNA Translation: JAB23044.1
GAMR01004458 mRNA Translation: JAB29474.1
GAMQ01004085 mRNA Translation: JAB37766.1
GAMP01006215 mRNA Translation: JAB46540.1

Genome annotation databases

EnsembliENSCJAT00000016607; ENSCJAP00000015718; ENSCJAG00000008494

Similar proteinsi

Entry informationi

Entry nameiU3FSH7_CALJA
AccessioniPrimary (citable) accession number: U3FSH7
Secondary accession number(s): F7EL11
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: June 20, 2018
This is version 20 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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