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Protein

Vesicle transport protein

Gene

20197708

Organism
Helobdella robusta (Californian leech)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.UniRule annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

GO - Biological processi

Keywordsi

Biological processProtein transportUniRule annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Vesicle transport proteinUniRule annotation
Gene namesi
Name:20197708Imported
ORF Names:HELRODRAFT_157395Imported
OrganismiHelobdella robusta (Californian leech)Imported
Taxonomic identifieri6412 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaAnnelidaClitellataHirudineaHirudinidaGlossiphoniiformesGlossiphoniidaeHelobdella
Proteomesi
  • UP000015101 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 64HelicalUniRule annotationAdd BLAST26
Transmembranei70 – 93HelicalUniRule annotationAdd BLAST24
Transmembranei114 – 135HelicalUniRule annotationAdd BLAST22

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the SFT2 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

OMAiRWIATAM
OrthoDBiEOG091G0UCR

Family and domain databases

InterProiView protein in InterPro
IPR007305 Vesicle_transpt_Got1/SFT2
IPR011691 Vesicle_transpt_SFT2
PANTHERiPTHR23137 PTHR23137, 1 hit
PfamiView protein in Pfam
PF04178 Got1, 1 hit

Sequencei

Sequence statusi: Complete.

T1EMA8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDKIRRSLGG QEDTNDETGI ITEISNATTF SWSTRIKGFL ICMIAGVICS
60 70 80 90 100
LLASCRFGTF FLAIPSNVGI RLFAVFYSIG NIMALSSTCF LMGPLNQLKK
110 120 130 140 150
MFAETRIIAT MMFLWKKTVL AVLFCCLQFL AMAWYSLTYI PYARDAVKKC

VCSCVDV
Length:157
Mass (Da):17,526
Last modified:October 16, 2013 - v1
Checksum:iD68A2AEDD4C389B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMQM01005592 Genomic DNA No translation available.
KB097026 Genomic DNA Translation: ESN99935.1
RefSeqiXP_009021953.1, XM_009023705.1

Genome annotation databases

EnsemblMetazoaiHelroT157395; HelroP157395; HelroG157395
GeneIDi20197708
KEGGihro:HELRODRAFT_157395

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMQM01005592 Genomic DNA No translation available.
KB097026 Genomic DNA Translation: ESN99935.1
RefSeqiXP_009021953.1, XM_009023705.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiHelroT157395; HelroP157395; HelroG157395
GeneIDi20197708
KEGGihro:HELRODRAFT_157395

Organism-specific databases

CTDi20197708

Phylogenomic databases

OMAiRWIATAM
OrthoDBiEOG091G0UCR

Family and domain databases

InterProiView protein in InterPro
IPR007305 Vesicle_transpt_Got1/SFT2
IPR011691 Vesicle_transpt_SFT2
PANTHERiPTHR23137 PTHR23137, 1 hit
PfamiView protein in Pfam
PF04178 Got1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiT1EMA8_HELRO
AccessioniPrimary (citable) accession number: T1EMA8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: November 7, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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