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Protein

3-oxoacyl-[acyl-carrier-protein] synthase 2

Gene

fabF

Organism
Bacteriovorax sp. DB6_IX
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

(Z)-hexadec-11-enoyl-[acyl-carrier-protein] + malonyl-[acyl-carrier-protein] = (Z)-3-oxooctadec-13-enoyl-[acyl-carrier-protein] + CO2 + [acyl-carrier-protein].UniRule annotation

Pathwayi: fatty acid biosynthesis

This protein is involved in the pathway fatty acid biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway fatty acid biosynthesis and in Lipid metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei160UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAcyltransferaseUniRule annotationImported, Transferase
Biological processFatty acid biosynthesisUniRule annotation, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism

Enzyme and pathway databases

UniPathwayi
UPA00094

Names & Taxonomyi

Protein namesi
Recommended name:
3-oxoacyl-[acyl-carrier-protein] synthase 2UniRule annotation (EC:2.3.1.179UniRule annotation)
Gene namesi
Name:fabFImported
ORF Names:M901_0689Imported
OrganismiBacteriovorax sp. DB6_IXImported
Taxonomic identifieri1353530 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaOligoflexiaBacteriovoracalesBacteriovoracaceaeBacteriovorax
Proteomesi
  • UP000015812 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 411PKS_KSInterPro annotationAdd BLAST411

Sequence similaritiesi

Belongs to the beta-ketoacyl-ACP synthases family.UniRule annotation

Family and domain databases

Gene3Di3.40.47.10, 2 hits
InterProiView protein in InterPro
IPR017568 3-oxoacyl-ACP_synth-2
IPR018201 Ketoacyl_synth_AS
IPR014031 Ketoacyl_synth_C
IPR014030 Ketoacyl_synth_N
IPR020841 PKS_Beta-ketoAc_synthase_dom
IPR016039 Thiolase-like
PfamiView protein in Pfam
PF00109 ketoacyl-synt, 1 hit
PF02801 Ketoacyl-synt_C, 1 hit
PIRSFiPIRSF000447 KAS_II, 1 hit
SMARTiView protein in SMART
SM00825 PKS_KS, 1 hit
SUPFAMiSSF53901 SSF53901, 2 hits
TIGRFAMsiTIGR03150 fabF, 1 hit
PROSITEiView protein in PROSITE
PS00606 B_KETOACYL_SYNTHASE, 1 hit

Sequencei

Sequence statusi: Complete.

T0T5V9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAITGMGTIC ALGQNLNDVW NGLVEGRSGI STVENYDIDQ LAVKIAGEVK
60 70 80 90 100
NFELSEDLLE AKDQKKYDRF IHFGLHATDE ALKNSGLNLK DYDPYKVGAI
110 120 130 140 150
LGVGMGGFPI TEETGKMFHE RGPRRISPFF IPAIIPNMAT GLLSIKYGFM
160 170 180 190 200
GVNYTVASAC ASSCHAISTA VEEIRSGRHD VMITGGTEAV VCNLAMGGFI
210 220 230 240 250
NMKAFSKRVD EPEKASRPFD TDRDGFVMGE GAGVLILEDL ESAKKRGATI
260 270 280 290 300
YAEIVGHGAS SDAHHITAPH PEGAGAFGCM KKAIEDAGIK PEDIGYVNAH
310 320 330 340 350
GTSTPLGDKA ETKAIKMVLG EDHAKTINVS STKSMVGHLL GAAGGVETVF
360 370 380 390 400
TAMTLHTGVI PPTINLDNQD PECDLNYTAN VAQKKQVDYA LNNSFGFGST
410
NSSLVLKRYT E
Length:411
Mass (Da):43,856
Last modified:October 16, 2013 - v1
Checksum:i3E7AB81643652CD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AUNJ01000030 Genomic DNA Translation: EQC52633.1

Genome annotation databases

EnsemblBacteriaiEQC52633; EQC52633; M901_0689
PATRICifig|1353530.3.peg.180

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AUNJ01000030 Genomic DNA Translation: EQC52633.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEQC52633; EQC52633; M901_0689
PATRICifig|1353530.3.peg.180

Enzyme and pathway databases

UniPathwayi
UPA00094

Family and domain databases

Gene3Di3.40.47.10, 2 hits
InterProiView protein in InterPro
IPR017568 3-oxoacyl-ACP_synth-2
IPR018201 Ketoacyl_synth_AS
IPR014031 Ketoacyl_synth_C
IPR014030 Ketoacyl_synth_N
IPR020841 PKS_Beta-ketoAc_synthase_dom
IPR016039 Thiolase-like
PfamiView protein in Pfam
PF00109 ketoacyl-synt, 1 hit
PF02801 Ketoacyl-synt_C, 1 hit
PIRSFiPIRSF000447 KAS_II, 1 hit
SMARTiView protein in SMART
SM00825 PKS_KS, 1 hit
SUPFAMiSSF53901 SSF53901, 2 hits
TIGRFAMsiTIGR03150 fabF, 1 hit
PROSITEiView protein in PROSITE
PS00606 B_KETOACYL_SYNTHASE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiT0T5V9_9PROT
AccessioniPrimary (citable) accession number: T0T5V9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: March 28, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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