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Protein
Submitted name:

ATP-dependent RNA helicase Uap56

Gene

SPOG_02106

Organism
Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) (Fission yeast)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent RNA helicase Uap56Imported
Gene namesi
ORF Names:SPOG_02106Imported
OrganismiSchizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) (Fission yeast)Imported
Taxonomic identifieri653667 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000015464 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 79Q_MOTIFInterPro annotationAdd BLAST29
Domaini82 – 257Helicase ATP-bindingInterPro annotationAdd BLAST176
Domaini269 – 430Helicase C-terminalInterPro annotationAdd BLAST162

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 21Sequence analysisAdd BLAST21

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi51 – 79Q motifPROSITE-ProRule annotationAdd BLAST29

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OrthoDBiEOG092C2V3O

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit

Sequencei

Sequence statusi: Complete.

S9X6S7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASAQEDLID YEEEEDLVQD QSAQGTTTTA ETTENGEKSD KKGSYVGIHS
60 70 80 90 100
TGFRDFLLKP ELLRAITDSG FEHPSEVQQV CIPQSILGTD VLCQAKSGMG
110 120 130 140 150
KTAVFVLSTL QQIEPVDGEV SVLVLCHTRE LAFQIKNEYA RFSKYLPDVR
160 170 180 190 200
TSVFYGGINI KQDMEAFKDK AKAPHIVVAT PGRLNALVRE KIMRVNNVKH
210 220 230 240 250
FVLDECDKLL DSVDMRRDIQ EVFRATPPQK QVMMFSATLS SEVRPICKKF
260 270 280 290 300
MQNPLEIYVD DETKLTLHGL QQHFVKLQEK EKNRKINDLL DSLEFNQVVI
310 320 330 340 350
FVKSVSRANE LDRLLRECNF PSICIHGGLP QEERIKRYKA FKDFDKRLCV
360 370 380 390 400
ATDVFGRGID IERVNIVINY DMPDSPDTYL HRVGRAGRFG TKGLAITFAS
410 420 430
SDEDSQILDK IQERFEVNIT ELPDEIDVSS YMNA
Length:434
Mass (Da):49,258
Last modified:October 16, 2013 - v1
Checksum:iAE7B4670288F2857
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KE546989 Genomic DNA Translation: EPY52787.1
RefSeqiXP_013022665.1, XM_013167211.1

Genome annotation databases

EnsemblFungiiEPY52787; EPY52787; SPOG_02106
GeneIDi25036430

Similar proteinsi

Entry informationi

Entry nameiS9X6S7_SCHCR
AccessioniPrimary (citable) accession number: S9X6S7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: July 18, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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