Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 32 (29 Sep 2021)
Sequence version 1 (16 Oct 2013)
Previous versions | rss
Add a publicationFeedback
Protein
Submitted name:

Anticodon binding domain-containing protein

Gene

TGME49_254200

Organism
Toxoplasma gondii (strain ATCC 50611 / Me49)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionAminoacyl-tRNA synthetaseARBA annotation, Ligase
LigandATP-bindingARBA annotation, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Anticodon binding domain-containing proteinImported (EC:6.1.1.14Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:TGME49_254200Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiToxoplasma gondii (strain ATCC 50611 / Me49)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri508771 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaSarAlveolataApicomplexaConoidasidaCoccidiaEucoccidioridaEimeriorinaSarcocystidaeToxoplasma
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001529 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome III

Organism-specific databases

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
ToxoDB:TGME49_254200

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

PTM databases

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
S8FDH8

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini696 – 892AA_TRNA_LIGASE_IIInterPro annotationAdd BLAST197

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni141 – 161DisorderedSequence analysisAdd BLAST21
Regioni193 – 246DisorderedSequence analysisAdd BLAST54
Regioni383 – 458DisorderedSequence analysisAdd BLAST76
Regioni534 – 577DisorderedSequence analysisAdd BLAST44
Regioni629 – 668DisorderedSequence analysisAdd BLAST40
Regioni813 – 847DisorderedSequence analysisAdd BLAST35

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi141 – 155Polar residuesSequence analysisAdd BLAST15
Compositional biasi202 – 219Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi401 – 417Basic and acidic residuesSequence analysisAdd BLAST17
Compositional biasi427 – 455Basic and acidic residuesSequence analysisAdd BLAST29
Compositional biasi538 – 577Basic and acidic residuesSequence analysisAdd BLAST40
Compositional biasi632 – 664Basic and acidic residuesSequence analysisAdd BLAST33

Phylogenomic databases

Database for complete collections of gene phylogenies

More...
PhylomeDBi
S8FDH8

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.50.800, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR006195, aa-tRNA-synth_II
IPR004154, Anticodon-bd
IPR036621, Anticodon-bd_dom_sf
IPR027031, Gly-tRNA_synthase/POLG2

The PANTHER Classification System

More...
PANTHERi
PTHR10745, PTHR10745, 3 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03129, HGTP_anticodon, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50862, AA_TRNA_LIGASE_II, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

S8FDH8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVGVRLLSSF FFCVVSSLFR FIPAVSLAFP PSGSAFPLHR RRLGALAFSL
60 70 80 90 100
LNGKELSTVA SPLTPYGASG DSKTSRASLF QFTPRPYSFA FPSSPSASSS
110 120 130 140 150
LAASSLPPLR PPSLGAGGGQ ANGASFASSL CRNSVRLSFS PTGGRRATNV
160 170 180 190 200
SGAQATEGDR RLGRLGAALS RMPTNEPSIE RKEEATRIRQ PPLNCSRGQC
210 220 230 240 250
AAARDADRDA DRDAGRDAEG VTAGEVMESS LKGRERKPQQ PGVRQTGVRP
260 270 280 290 300
LLPIDKRFGV FPGPAEPVKR LCLSLQDLKT FCKDHAIVVP AAELYGGLKG
310 320 330 340 350
TVDFGAVGHR LLQNLRRALN SFFLRDACEP LSTSLHRDLA SLSPEAPGDA
360 370 380 390 400
LTKDLRSLPL LLSPSPPRHS QSVSLPEFRW RGPSWSEKEP TEPLHPIQQK
410 420 430 440 450
RAAEQSRESR DEAEERSSAS NAAWMRETQT DRKRSQAGES DVCEEARERG
460 470 480 490 500
EGRRAEGAFI PPPWGPIFAV ETACLGPAAV WAGSGHTRHF VDSVVRCRDT
510 520 530 540 550
GQVFRTDSLV FREKEISSRR GSRFEVRPLS ATALRPSEEA REAQRSCADG
560 570 580 590 600
NREHCQIDGK KIRERDEQGT EEQGRFRHKE SFSSWRLLTE APLERFPELP
610 620 630 640 650
SPVTGRIGAL STPYLRNLML QTRLSRYTSL KDTEPSGERK GGEEALGYAR
660 670 680 690 700
GRRGDTKGDL PLDADTEESA GIFRPETAQE MLISYRSLLP PFLAPSLPFG
710 720 730 740 750
IAQEGRSWRN ELISTSRFLF RLREFRQFEI EYFLDATKAN SFHTLNAWIY
760 770 780 790 800
ELARFFTAIG LPTDLLSVAE QGEKDRSHYS SRCVDFSFRF PFGDAELCGI
810 820 830 840 850
SLRGDNDLRA HQQHSGQSLA LPPASGSSST SSDCASSASP SSSASSGILP
860 870 880 890 900
HVVEPSVGLE RLLLALLASS FVRDTVDGKM RTFLNLHPAL APFQAAVFPV
910 920 930 940 950
VTNVHELTAR ARRLCGWLRE RGFSVLWDFS STSIGRRYRR ADGLGIPFCF
960 970 980 990 1000
TLDRTSLNDG TVTVRWRNSA EQRRLKFEEA ESFLKERTEF RFQDFCWKPS
1010
EPQRKGAPNN PMN
Length:1,013
Mass (Da):111,815
Last modified:October 16, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i09CA9B3B6E64EDC7
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KE138817 Genomic DNA Translation: EPT31743.1

NCBI Reference Sequences

More...
RefSeqi
XP_018638147.1, XM_018781044.1

Genome annotation databases

Ensembl protists genome annotation project

More...
EnsemblProtistsi
TGME49_254200-t26_1; TGME49_254200-t26_1; TGME49_254200

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
7900055

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
tgo:TGME49_254200

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KE138817 Genomic DNA Translation: EPT31743.1
RefSeqiXP_018638147.1, XM_018781044.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

PTM databases

SwissPalmiS8FDH8

Genome annotation databases

EnsemblProtistsiTGME49_254200-t26_1; TGME49_254200-t26_1; TGME49_254200
GeneIDi7900055
KEGGitgo:TGME49_254200

Organism-specific databases

VEuPathDBiToxoDB:TGME49_254200

Phylogenomic databases

PhylomeDBiS8FDH8

Family and domain databases

Gene3Di3.40.50.800, 1 hit
InterProiView protein in InterPro
IPR006195, aa-tRNA-synth_II
IPR004154, Anticodon-bd
IPR036621, Anticodon-bd_dom_sf
IPR027031, Gly-tRNA_synthase/POLG2
PANTHERiPTHR10745, PTHR10745, 3 hits
PfamiView protein in Pfam
PF03129, HGTP_anticodon, 1 hit
PROSITEiView protein in PROSITE
PS50862, AA_TRNA_LIGASE_II, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiS8FDH8_TOXGM
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: S8FDH8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: September 29, 2021
This is version 32 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again