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Entry version 37 (03 Jul 2019)
Sequence version 1 (16 Oct 2013)
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Protein
Submitted name:

Urease

Gene

GLOTRDRAFT_62463

Organism
Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) (Brown rot fungus)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Ni cationUniRule annotationNote: Binds 2 nickel ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi403Nickel 1; via tele nitrogenUniRule annotation1
Metal bindingi405Nickel 1; via tele nitrogenUniRule annotation1
Metal bindingi486Nickel 1; via carbamate groupUniRule annotation1
Metal bindingi486Nickel 2; via carbamate groupUniRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei488SubstratePROSITE-ProRule annotation1
Metal bindingi515Nickel 2; via pros nitrogenUniRule annotation1
Metal bindingi541Nickel 2; via tele nitrogenUniRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei589Proton donorUniRule annotation1
Metal bindingi629Nickel 1UniRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolasePROSITE-ProRule annotation
LigandMetal-bindingUniRule annotation, NickelUniRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
UreaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:GLOTRDRAFT_62463Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiGloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) (Brown rot fungus)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri670483 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesGloeophyllalesGloeophyllaceaeGloeophyllum
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000030669 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei486N6-carboxylysineUniRule annotation1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Carbamylation allows a single lysine to coordinate two nickel ions.UniRule annotation

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
104355.XP_007867358.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini398 – 838UreaseInterPro annotationAdd BLAST441

Phylogenomic databases

KEGG Orthology (KO)

More...
KOi
K01427

Database of Orthologous Groups

More...
OrthoDBi
183108at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00375 Urease_alpha, 1 hit
cd00407 Urease_beta, 1 hit
cd00390 Urease_gamma, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.10.150.10, 1 hit
2.30.40.10, 1 hit
3.30.280.10, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_01953 Urease_alpha, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR006680 Amidohydro-rel
IPR011059 Metal-dep_hydrolase_composite
IPR032466 Metal_Hydrolase
IPR008221 Urease
IPR011612 Urease_alpha_N_dom
IPR017950 Urease_AS
IPR005848 Urease_asu
IPR017951 Urease_asu_c
IPR002019 Urease_beta
IPR036461 Urease_betasu_sf
IPR002026 Urease_gamma/gamma-beta_su
IPR036463 Urease_gamma_sf
IPR029754 Urease_Ni-bd

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01979 Amidohydro_1, 1 hit
PF00449 Urease_alpha, 1 hit
PF00699 Urease_beta, 1 hit
PF00547 Urease_gamma, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF001222 Urease, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR01752 UREASE

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51278 SSF51278, 1 hit
SSF51338 SSF51338, 2 hits
SSF51556 SSF51556, 1 hit
SSF54111 SSF54111, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01792 urease_alph, 1 hit
TIGR00192 urease_beta, 1 hit
TIGR00193 urease_gam, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01120 UREASE_1, 1 hit
PS00145 UREASE_2, 1 hit
PS51368 UREASE_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

S7Q1X6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHLLPREEAK LLLHQAGFLA QKRLARGLKL NQTEATALIA SQLQERIRDG
60 70 80 90 100
QHSVAELMQH GKTLLGRRHV LPSVPGLLHE IQVEGTFQDG VFLVTVHDPI
110 120 130 140 150
CTEDGDLAAA LYGSFLPVPP NEKFPVADES EYAKEKAPGA VIVKKERIVI
160 170 180 190 200
NKGRERVKLK VTNNGDRPIQ IGSHYHFIET NASLSFDRAK AYGKRLDIAA
210 220 230 240 250
GTAVRFEPGD SKTVTLCAIA GAQIISGGNL LASGIVDADR TDEIVRNLVQ
260 270 280 290 300
KGFGHVPEPG AAEVHEDTDI GRQAYVAMYG PTVGDKVRLG DTALWIEVER
310 320 330 340 350
DETVYGDEVK FGGGKSIREG MGQATNRPAS ECLDLVITNA LIVDWSGIYK
360 370 380 390 400
ADIGVKDGVI TGIGKAGNPD VMAHVHPALT IGSSTEVIAG EKLILTAGAV
410 420 430 440 450
DAHVHYICPQ QVYEALAAGT TTMIGGGTGP SAGTNATTCT PSPFYMRHML
460 470 480 490 500
AATDGLPMNF AFTGKGNDAG PQALEDIVRA GAAGLKLHED WGSTPAATMN
510 520 530 540 550
CLDVGDKYDV QVNIHTDTLN ESGFVESTIA AFGNRTIHTY HTEGAGGGHA
560 570 580 590 600
PDIIVVCGQE NVLPSSTNPT RPYTNNTLDE HLDMLMVCHH LDKSIPEDLA
610 620 630 640 650
FAESRIRGET VAAEDVLQDM GAISMISSDS QAMGRVGEVV SRTWRTASKM
660 670 680 690 700
REFRGPLASL GDSEGRDNAR VKRYIAKYTI NPAITHGISH LIGHVAVGTL
710 720 730 740 750
ADLVLWKPEN FGAKPEMILK SGVIAWSQMG DANASIPTVQ PFYSKPMWGS
760 770 780 790 800
YPASAALNSV AFVSEISLTS GVIKSYGLSK RFEAVKNCRN VKKGDMKWND
810 820 830
AVPKMSVDPE SYEVRADGEL ADVAPAERLP LARTYNLF
Length:838
Mass (Da):89,965
Last modified:October 16, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8C50E5E69863B91B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei838Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KB469304 Genomic DNA Translation: EPQ54001.1

NCBI Reference Sequences

More...
RefSeqi
XP_007867358.1, XM_007869167.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
EPQ54001; EPQ54001; GLOTRDRAFT_62463

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
19307480

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
gtr:GLOTRDRAFT_62463

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB469304 Genomic DNA Translation: EPQ54001.1
RefSeqiXP_007867358.1, XM_007869167.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi104355.XP_007867358.1

Genome annotation databases

EnsemblFungiiEPQ54001; EPQ54001; GLOTRDRAFT_62463
GeneIDi19307480
KEGGigtr:GLOTRDRAFT_62463

Phylogenomic databases

KOiK01427
OrthoDBi183108at2759

Family and domain databases

CDDicd00375 Urease_alpha, 1 hit
cd00407 Urease_beta, 1 hit
cd00390 Urease_gamma, 1 hit
Gene3Di2.10.150.10, 1 hit
2.30.40.10, 1 hit
3.30.280.10, 1 hit
HAMAPiMF_01953 Urease_alpha, 1 hit
InterProiView protein in InterPro
IPR006680 Amidohydro-rel
IPR011059 Metal-dep_hydrolase_composite
IPR032466 Metal_Hydrolase
IPR008221 Urease
IPR011612 Urease_alpha_N_dom
IPR017950 Urease_AS
IPR005848 Urease_asu
IPR017951 Urease_asu_c
IPR002019 Urease_beta
IPR036461 Urease_betasu_sf
IPR002026 Urease_gamma/gamma-beta_su
IPR036463 Urease_gamma_sf
IPR029754 Urease_Ni-bd
PfamiView protein in Pfam
PF01979 Amidohydro_1, 1 hit
PF00449 Urease_alpha, 1 hit
PF00699 Urease_beta, 1 hit
PF00547 Urease_gamma, 1 hit
PIRSFiPIRSF001222 Urease, 1 hit
PRINTSiPR01752 UREASE
SUPFAMiSSF51278 SSF51278, 1 hit
SSF51338 SSF51338, 2 hits
SSF51556 SSF51556, 1 hit
SSF54111 SSF54111, 1 hit
TIGRFAMsiTIGR01792 urease_alph, 1 hit
TIGR00192 urease_beta, 1 hit
TIGR00193 urease_gam, 1 hit
PROSITEiView protein in PROSITE
PS01120 UREASE_1, 1 hit
PS00145 UREASE_2, 1 hit
PS51368 UREASE_3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiS7Q1X6_GLOTA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: S7Q1X6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: July 3, 2019
This is version 37 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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