UniProtKB - S5SXC6 (S5SXC6_RHIET)
Protein
Submitted name:
Type VI secretion system IcmF family protein
Gene
REMIM1_PF00464
Organism
Rhizobium etli bv. mimosae str. Mim1
Status
Names & Taxonomyi
Protein namesi | Submitted name: Type VI secretion system IcmF family proteinImported |
Gene namesi | ORF Names:REMIM1_PF00464Imported |
Encoded oni | Plasmid pRetMIM1fImported |
Organismi | Rhizobium etli bv. mimosae str. Mim1Imported |
Taxonomic identifieri | 1328306 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › |
Proteomesi |
|
Subcellular locationi
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 21 – 44 | HelicalSequence analysisAdd BLAST | 24 | |
Transmembranei | 56 – 76 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 436 – 456 | HelicalSequence analysisAdd BLAST | 21 |
GO - Cellular componenti
- integral component of membrane Source: UniProtKB-KW
Keywords - Cellular componenti
MembraneFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 207 – 444 | IcmF-related_NInterPro annotationAdd BLAST | 238 | |
Domaini | 498 – 794 | IcmF-relatedInterPro annotationAdd BLAST | 297 | |
Domaini | 1037 – 1139 | IcmF_CInterPro annotationAdd BLAST | 103 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 819 – 855 | DisorderedSequence analysisAdd BLAST | 37 |
Keywords - Domaini
Transmembrane, Transmembrane helixSequence analysisPhylogenomic databases
HOGENOMi | CLU_003353_2_1_5 |
OrthoDBi | 393769at2 |
Family and domain databases
InterProi | View protein in InterPro IPR009612, IcmF-related IPR025743, IcmF-related_N_dom IPR010623, IcmF_C IPR027417, P-loop_NTPase IPR017731, TssM1-like |
Pfami | View protein in Pfam PF06761, IcmF-related, 1 hit PF14331, IcmF-related_N, 1 hit PF06744, IcmF_C, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR03348, VI_IcmF, 1 hit |
i Sequence
Sequence statusi: Complete.
S5SXC6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MNPISYFYTL RSYVEAYAGL LGRRFISIIW VAAICVVIWF YGYLAAYGDF
60 70 80 90 100
KPLASATARL TLIGVVIAAW LAYLLFTVIR DGRRDKQLVE GIERDAEAEA
110 120 130 140 150
AASQQAEVGE IHSRLKEALQ LLRRITKRRF GYIYELPWYV IFGAPGSGKT
160 170 180 190 200
TALTNSGLKF PLGDALGSNS VKGVGGTRNC NWWFTDEAIL IDTAGRYTTQ
210 220 230 240 250
DDLNGTAKAG WEGFLGLLRK YRRSQPINGA LVTLSIGDLL TRDPEAQREE
260 270 280 290 300
IRAIRQRLSE LDELLHARVP VYLLLTKADL LTGFVEFFDG FNKSDREQVW
310 320 330 340 350
GTTFGLDESY KAANLPERFT EEFTLLQQRV DAMLIERLQQ EPNPELRGRI
360 370 380 390 400
FRFPAELASL KERLHEVTTE LCSGSKLVEA PLLRGIYFAS GTQREETAAT
410 420 430 440 450
PRMRRSYFLS RLFKEVIFGE ASLVARDKRL SGRQLLFRRA AYASAVLLLA
460 470 480 490 500
MVLTSWTATY FQNTAALAGA ERRIDAYEQL VRGVPVRDVS DADFLRILPA
510 520 530 540 550
LDNLAAVTTD FSRTRVWPVS LGLDQEGKVA SRQREAYQRA LNTLLLPRML
560 570 580 590 600
VQLQKEMTET TDVNRTFDAL KLYGMLGGLG PVNVDFASLE AEDMFTRLYP
610 620 630 640 650
DEGRAAARKA LIAHAGAMAR GALPPIELDK TLIAKAREII RSQNIASRAY
660 670 680 690 700
EILAEHRASR ALPGWSPAGA LGPLGEQAFE RTSKAPLGES IPGLFSATGY
710 720 730 740 750
RTVVLPEISE AAREALDEQW VRGLPNPAGV TVDTVAQATL QLYFDKFDQR
760 770 780 790 800
WSTLLTDIRV KPSQTISDAA ETTRILAGKP GPVETIANSI AAATDLRGPS
810 820 830 840 850
AEIASAAGDS LTDATTALSS AANAPDPFGP LREALKAPAG QSPLPDQSKQ
860 870 880 890 900
TPRSGIGQLE PILQKVQEQL SRATTSTAEV AKVFDVDSQL TDANQDLLQQ
910 920 930 940 950
ARKLPAPVDT WMAGLAADVG SLAVKSARSR ISDAWAAEGA GFCSNVVAGR
960 970 980 990 1000
YPFDRKSARD VAMSDFVRLF GPQGLFKTFF KEKLEAFVDT SASPWGWKGT
1010 1020 1030 1040 1050
FGAASIPSAA IAQFENADKI NRAFFPAGSK DPLITINVKP VSLTDAASAV
1060 1070 1080 1090 1100
MLEIEGERVV YFHGPIQSKS ISWPSAEASN TSRIAFQPGG WQQAMTENGD
1110 1120 1130 1140 1150
WSPFRLFDDA NVTIQGDDLF RAKFEQDGRA AEFDVQFGSV LNPFRLEALG
AFSCPAQF
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP005956 Genomic DNA Translation: AGS26129.1 |
RefSeqi | WP_020919499.1, NC_021911.1 |
Genome annotation databases
EnsemblBacteriai | AGS26129; AGS26129; REMIM1_PF00464 |
KEGGi | rel:REMIM1_PF00464 |
PATRICi | fig|1328306.3.peg.6566 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CP005956 Genomic DNA Translation: AGS26129.1 |
RefSeqi | WP_020919499.1, NC_021911.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblBacteriai | AGS26129; AGS26129; REMIM1_PF00464 |
KEGGi | rel:REMIM1_PF00464 |
PATRICi | fig|1328306.3.peg.6566 |
Phylogenomic databases
HOGENOMi | CLU_003353_2_1_5 |
OrthoDBi | 393769at2 |
Enzyme and pathway databases
BioCyci | RETL1328306:G1HJS-6138-MONOMER |
Family and domain databases
InterProi | View protein in InterPro IPR009612, IcmF-related IPR025743, IcmF-related_N_dom IPR010623, IcmF_C IPR027417, P-loop_NTPase IPR017731, TssM1-like |
Pfami | View protein in Pfam PF06761, IcmF-related, 1 hit PF14331, IcmF-related_N, 1 hit PF06744, IcmF_C, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR03348, VI_IcmF, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | S5SXC6_RHIET | |
Accessioni | S5SXC6Primary (citable) accession number: S5SXC6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | October 16, 2013 |
Last sequence update: | October 16, 2013 | |
Last modified: | December 2, 2020 | |
This is version 30 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |