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Protein

30S ribosomal protein S11, chloroplastic

Gene

rps11

Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S11, chloroplasticUniRule annotation
Gene namesi
Name:rps11UniRule annotationImported
Synonyms:4525082Imported
Encoded oniPlastid; ChloroplastImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastImported, Plastid

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

SMRiS4Z0I7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS11 family.UniRule annotation

Family and domain databases

Gene3Di3.30.420.80, 1 hit
HAMAPiMF_01310 Ribosomal_S11, 1 hit
InterProiView protein in InterPro
IPR001971 Ribosomal_S11
IPR018102 Ribosomal_S11_CS
IPR036967 Ribosomal_S11_sf
PANTHERiPTHR11759 PTHR11759, 1 hit
PfamiView protein in Pfam
PF00411 Ribosomal_S11, 1 hit
PIRSFiPIRSF002131 Ribosomal_S11, 1 hit
PROSITEiView protein in PROSITE
PS00054 RIBOSOMAL_S11, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.iShow all

S4Z0I7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKAIPKIGS RKKVRIGLRR NARFSLRKSA RRITKGVIHV QASFNNTIIT
60 70 80 90 100
VTDPQGRVVF WSSAGTCGFK SSRKASPYAG QRTAVDAIRT VGLQRAEVMV
110 120 130 140
KGAGSGRDAA LRAIAKSGVR LSCIRDVTPM PHNGCRPPKK RRL
Length:143
Mass (Da):15,566
Last modified:October 16, 2013 - v1
Checksum:i8DDB5190BDFA7BCF
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
S4Z1A4S4Z1A4_HORVV
DNA-directed RNA polymerase subunit...
rpoA 4525081, 4525082
339Annotation score:
A0A287EA09A0A287EA09_HORVV
Uncharacterized protein
4525082
448Annotation score:
A0A287E9B8A0A287E9B8_HORVV
Uncharacterized protein
4525082
261Annotation score:
A0A287U4P7A0A287U4P7_HORVV
Uncharacterized protein
4525082
257Annotation score:
A0A287RJG2A0A287RJG2_HORVV
Uncharacterized protein
4525082
261Annotation score:
A0A287RJV7A0A287RJV7_HORVV
Uncharacterized protein
4525082
257Annotation score:
A0A287RJL6A0A287RJL6_HORVV
Uncharacterized protein
4525082
355Annotation score:
A0A287RJN9A0A287RJN9_HORVV
Uncharacterized protein
4525082
339Annotation score:
A0A287EBF0A0A287EBF0_HORVV
Uncharacterized protein
4525082
233Annotation score:
A0A287TY42A0A287TY42_HORVV
Uncharacterized protein
4525082
107Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KC912687 Genomic DNA Translation: AGP50787.1
KT962228 Genomic DNA Translation: AMA20278.1
RefSeqiYP_874685.1, NC_008590.1

Genome annotation databases

EnsemblPlantsiAGP50787; AGP50787; AGP50787
HORVU0Hr1G026190.1; HORVU0Hr1G026190.1; HORVU0Hr1G026190
HORVU0Hr1G026280.1; HORVU0Hr1G026280.1; HORVU0Hr1G026280
HORVU0Hr1G026820.1; HORVU0Hr1G026820.1; HORVU0Hr1G026820
HORVU0Hr1G027520.1; HORVU0Hr1G027520.1; HORVU0Hr1G027520
HORVU0Hr1G028380.1; HORVU0Hr1G028380.1; HORVU0Hr1G028380
HORVU0Hr1G029960.5; HORVU0Hr1G029960.5; HORVU0Hr1G029960
HORVU0Hr1G030690.1; HORVU0Hr1G030690.1; HORVU0Hr1G030690
HORVU0Hr1G032940.1; HORVU0Hr1G032940.1; HORVU0Hr1G032940
HORVU0Hr1G033450.1; HORVU0Hr1G033450.1; HORVU0Hr1G033450
HORVU0Hr1G033720.1; HORVU0Hr1G033720.1; HORVU0Hr1G033720
HORVU0Hr1G034340.1; HORVU0Hr1G034340.1; HORVU0Hr1G034340
HORVU0Hr1G036970.1; HORVU0Hr1G036970.1; HORVU0Hr1G036970
HORVU0Hr1G037380.1; HORVU0Hr1G037380.1; HORVU0Hr1G037380
HORVU0Hr1G037940.1; HORVU0Hr1G037940.1; HORVU0Hr1G037940
HORVU5Hr1G065000.2; HORVU5Hr1G065000.2; HORVU5Hr1G065000
HORVU6Hr1G037240.1; HORVU6Hr1G037240.1; HORVU6Hr1G037240
HORVU6Hr1G049440.5; HORVU6Hr1G049440.5; HORVU6Hr1G049440
GeneIDi4525082
GrameneiAGP50787; AGP50787; AGP50787
HORVU0Hr1G026190.1; HORVU0Hr1G026190.1; HORVU0Hr1G026190
HORVU0Hr1G026280.1; HORVU0Hr1G026280.1; HORVU0Hr1G026280
HORVU0Hr1G026820.1; HORVU0Hr1G026820.1; HORVU0Hr1G026820
HORVU0Hr1G027520.1; HORVU0Hr1G027520.1; HORVU0Hr1G027520
HORVU0Hr1G028380.1; HORVU0Hr1G028380.1; HORVU0Hr1G028380
HORVU0Hr1G029960.5; HORVU0Hr1G029960.5; HORVU0Hr1G029960
HORVU0Hr1G030690.1; HORVU0Hr1G030690.1; HORVU0Hr1G030690
HORVU0Hr1G032940.1; HORVU0Hr1G032940.1; HORVU0Hr1G032940
HORVU0Hr1G033450.1; HORVU0Hr1G033450.1; HORVU0Hr1G033450
HORVU0Hr1G033720.1; HORVU0Hr1G033720.1; HORVU0Hr1G033720
HORVU0Hr1G034340.1; HORVU0Hr1G034340.1; HORVU0Hr1G034340
HORVU0Hr1G036970.1; HORVU0Hr1G036970.1; HORVU0Hr1G036970
HORVU0Hr1G037380.1; HORVU0Hr1G037380.1; HORVU0Hr1G037380
HORVU0Hr1G037940.1; HORVU0Hr1G037940.1; HORVU0Hr1G037940
HORVU5Hr1G065000.2; HORVU5Hr1G065000.2; HORVU5Hr1G065000
HORVU6Hr1G037240.1; HORVU6Hr1G037240.1; HORVU6Hr1G037240
HORVU6Hr1G049440.5; HORVU6Hr1G049440.5; HORVU6Hr1G049440

Similar proteinsi

Entry informationi

Entry nameiS4Z0I7_HORVV
AccessioniPrimary (citable) accession number: S4Z0I7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: July 18, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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