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Protein
Submitted name:

Outer dense fiber protein 2

Gene

ODF2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Outer dense fiber protein 2Imported
Gene namesi
Name:ODF2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

EuPathDBiHostDB:ENSG00000136811.16
HGNCiHGNC:8114 ODF2

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000136811

PTM / Processingi

Proteomic databases

MaxQBiS4R3R9
PeptideAtlasiS4R3R9
PRIDEiS4R3R9

Expressioni

Gene expression databases

BgeeiENSG00000136811 Expressed in 182 organ(s), highest expression level in testis
ExpressionAtlasiS4R3R9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliS4R3R9
SMRiS4R3R9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili23 – 92Sequence analysisAdd BLAST70
Coiled coili159 – 236Sequence analysisAdd BLAST78

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063497

Family and domain databases

InterProiView protein in InterPro
IPR026099 Odf2-rel
PANTHERiPTHR23162 PTHR23162, 2 hits

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

S4R3R9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
EIEAARRQFQ SQLADLQQLP DILKITEAKL AECQDQLQGY ERKNIDLTAI
60 70 80 90 100
ISDLRSRIEH QGDKLEMARE KHQASQKENK QLSLKVDELE RLEALGPISV
110 120 130 140 150
LFLGPETFSH LAVFCLVCGS VEGLEALEGT RQTSEEKLLP FQWKLEATSA
160 170 180 190 200
QNIEFLQVIA KREEAIHQSQ LRLEEKTREC GTLARQLESA IEDARRQVEQ
210 220 230 240
TKEHALSKER AAQNKILDLE TQLSRTKTEL SQLRRSRDDA D
Length:241
Mass (Da):27,570
Last modified:September 18, 2013 - v1
Checksum:iF15CB19CBCC06F06
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q5BJF6ODFP2_HUMAN
Outer dense fiber protein 2
ODF2
829Annotation score:
Q5T4C6Q5T4C6_HUMAN
Outer dense fiber protein 2
ODF2
205Annotation score:
Q5T4C3Q5T4C3_HUMAN
Outer dense fiber protein 2
ODF2
386Annotation score:
Q5T4C8Q5T4C8_HUMAN
Outer dense fiber protein 2
ODF2
156Annotation score:
S4R411S4R411_HUMAN
Outer dense fiber protein 2
ODF2
144Annotation score:
S4R462S4R462_HUMAN
Outer dense fiber protein 2
ODF2
100Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei241Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL359091 Genomic DNA No translation available.
AL445287 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000483070; ENSP00000474651; ENSG00000136811
UCSCiuc064wew.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL359091 Genomic DNA No translation available.
AL445287 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliS4R3R9
SMRiS4R3R9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiS4R3R9
PeptideAtlasiS4R3R9
PRIDEiS4R3R9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000483070; ENSP00000474651; ENSG00000136811
UCSCiuc064wew.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000136811.16
HGNCiHGNC:8114 ODF2
OpenTargetsiENSG00000136811
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00530000063497

Miscellaneous databases

ChiTaRSiODF2 human

Gene expression databases

BgeeiENSG00000136811 Expressed in 182 organ(s), highest expression level in testis
ExpressionAtlasiS4R3R9 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR026099 Odf2-rel
PANTHERiPTHR23162 PTHR23162, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiS4R3R9_HUMAN
AccessioniPrimary (citable) accession number: S4R3R9
Entry historyiIntegrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: September 12, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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