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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Delftia acidovorans CCUG 274B
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetaseUniRule annotationImported, Ligase
Biological processProtein biosynthesisUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
ORF Names:HMPREF9701_06273Imported
OrganismiDelftia acidovorans CCUG 274BImported
Taxonomic identifieri883101 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia
Proteomesi
  • UP000014416 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 92Arg_tRNA_synt_NInterPro annotationAdd BLAST87
Domaini448 – 565DALR_1InterPro annotationAdd BLAST118

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi128 – 138"HIGH" regionUniRule annotationAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

OrthoDBiPOG091H01RF

Family and domain databases

CDDicd00671 ArgRS_core, 1 hit
Gene3Di3.30.1360.70, 1 hit
3.40.50.620, 1 hit
HAMAPiMF_00123 Arg_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR001412 aa-tRNA-synth_I_CS
IPR001278 Arg-tRNA-ligase
IPR005148 Arg-tRNA-synth_N
IPR036695 Arg-tRNA-synth_N_sf
IPR035684 ArgRS_core
IPR008909 DALR_anticod-bd
IPR014729 Rossmann-like_a/b/a_fold
IPR009080 tRNAsynth_Ia_anticodon-bd
PANTHERiPTHR11956 PTHR11956, 1 hit
PfamiView protein in Pfam
PF03485 Arg_tRNA_synt_N, 1 hit
PF05746 DALR_1, 1 hit
PF00750 tRNA-synt_1d, 1 hit
PRINTSiPR01038 TRNASYNTHARG
SMARTiView protein in SMART
SM01016 Arg_tRNA_synt_N, 1 hit
SM00836 DALR_1, 1 hit
SUPFAMiSSF47323 SSF47323, 1 hit
SSF55190 SSF55190, 1 hit
TIGRFAMsiTIGR00456 argS, 1 hit
PROSITEiView protein in PROSITE
PS00178 AA_TRNA_LIGASE_I, 1 hit

Sequencei

Sequence statusi: Complete.

S2W4J1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLSVKQELLA ALAGELETLS PGAGARAAFE SPKVAAHGDF ACTAAMQLAK
60 70 80 90 100
PLKLNPRALG EQLKAALEAT PAFQRWVDAI EIAGPGFLNI RLKPAAKQQI
110 120 130 140 150
IREVLGQAEK FGWQADRGAK MLVEFVSANP TGPLHVGHGR QAALGDAICN
160 170 180 190 200
LYATQGWGVH REFYYNDAGV QIDTLTKSTQ LRAKGFKPGD ECWPIDPENP
210 220 230 240 250
ESKAFYNGSY IQDIADDFKA CKTVKADDRE FTANGDVEDY DNIRQFAVAY
260 270 280 290 300
LRNEQDKDLQ AFNLHFDEYY LESSLYTNGH VEDAVQRLIA GGHTYELDGA
310 320 330 340 350
LWLKSTDYGD DKDRVMRKQD GNYTYFVPDV AYHIQKFKRG YSKVVNIQGT
360 370 380 390 400
DHHGTIARVR AGLQAADVGI PAGYPDYVLH TMVRVVRGGE EVKISKRAGS
410 420 430 440 450
YVTLRDLIEW TSKDAVRFFL LSRKPDTEYT FDVDLAVAQN NDNPVYYVQY
460 470 480 490 500
AHARICSVLA AWGGDADTLK DVDLSALEGP QAQALMLQLA KYPAMLTSAA
510 520 530 540 550
EGNAPHDVTF YLRELASLYH SYYDAERILV DDEKVKLARL ALISATRQVL
560
HNGLAVLGVS APQRM
Length:565
Mass (Da):62,539
Last modified:September 18, 2013 - v1
Checksum:iFAE39A8DEF965DA9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGYX01000066 Genomic DNA Translation: EPD34121.1
RefSeqiWP_016450693.1, NZ_KE150320.1

Genome annotation databases

EnsemblBacteriaiEPD34121; EPD34121; HMPREF9701_06273
PATRICifig|883101.3.peg.6260

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGYX01000066 Genomic DNA Translation: EPD34121.1
RefSeqiWP_016450693.1, NZ_KE150320.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEPD34121; EPD34121; HMPREF9701_06273
PATRICifig|883101.3.peg.6260

Phylogenomic databases

OrthoDBiPOG091H01RF

Family and domain databases

CDDicd00671 ArgRS_core, 1 hit
Gene3Di3.30.1360.70, 1 hit
3.40.50.620, 1 hit
HAMAPiMF_00123 Arg_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR001412 aa-tRNA-synth_I_CS
IPR001278 Arg-tRNA-ligase
IPR005148 Arg-tRNA-synth_N
IPR036695 Arg-tRNA-synth_N_sf
IPR035684 ArgRS_core
IPR008909 DALR_anticod-bd
IPR014729 Rossmann-like_a/b/a_fold
IPR009080 tRNAsynth_Ia_anticodon-bd
PANTHERiPTHR11956 PTHR11956, 1 hit
PfamiView protein in Pfam
PF03485 Arg_tRNA_synt_N, 1 hit
PF05746 DALR_1, 1 hit
PF00750 tRNA-synt_1d, 1 hit
PRINTSiPR01038 TRNASYNTHARG
SMARTiView protein in SMART
SM01016 Arg_tRNA_synt_N, 1 hit
SM00836 DALR_1, 1 hit
SUPFAMiSSF47323 SSF47323, 1 hit
SSF55190 SSF55190, 1 hit
TIGRFAMsiTIGR00456 argS, 1 hit
PROSITEiView protein in PROSITE
PS00178 AA_TRNA_LIGASE_I, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiS2W4J1_DELAC
AccessioniPrimary (citable) accession number: S2W4J1
Entry historyiIntegrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: March 28, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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