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Protein
Submitted name:

S4-domain-containing heat shock protein

Gene

Lpp225_0338

Organism
Lactobacillus paracasei subsp. paracasei Lpp225
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
Biological processStress responseImported

Names & Taxonomyi

Protein namesi
Submitted name:
S4-domain-containing heat shock proteinImported
Gene namesi
ORF Names:Lpp225_0338Imported
OrganismiLactobacillus paracasei subsp. paracasei Lpp225Imported
Taxonomic identifieri1256225 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000014270 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliS2NDA3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61S4 RNA-bindingInterPro annotationAdd BLAST61

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR025490 RNAbp_HP1423
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF01479 S4, 1 hit
PIRSFiPIRSF038881 RNAbp_HP1423, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

S2NDA3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLDKFLKVS RIIKRRTVAK EIADKGRIMI NDKPAKSSSD VRVGDTLVIN
60 70 80
FGNKTLTVRA DDLVETTKKN DAAGMYTVLK EDYKETF
Length:87
Mass (Da):9,879
Last modified:September 18, 2013 - v1
Checksum:i3DAD485F2EDF3393
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ANMM01000002 Genomic DNA Translation: EPC38867.1
RefSeqiWP_003567635.1, NZ_ANMM01000002.1

Genome annotation databases

EnsemblBacteriaiEPC38867; EPC38867; Lpp225_0338
GeneIDi31583236
PATRICifig|1256225.3.peg.345

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ANMM01000002 Genomic DNA Translation: EPC38867.1
RefSeqiWP_003567635.1, NZ_ANMM01000002.1

3D structure databases

ProteinModelPortaliS2NDA3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEPC38867; EPC38867; Lpp225_0338
GeneIDi31583236
PATRICifig|1256225.3.peg.345

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR025490 RNAbp_HP1423
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF01479 S4, 1 hit
PIRSFiPIRSF038881 RNAbp_HP1423, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
PROSITEiView protein in PROSITE
PS50889 S4, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiS2NDA3_LACPA
AccessioniPrimary (citable) accession number: S2NDA3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: June 20, 2018
This is version 18 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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