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Protein
Submitted name:

Uncharacterized protein

Gene

C815_00461

Organism
Firmicutes bacterium M10-2
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 46H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi73 – 96H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C815_00461Imported
OrganismiFirmicutes bacterium M10-2Imported
Taxonomic identifieri1235796 [NCBI]
Taxonomic lineageiBacteriaFirmicutes
Proteomesi
  • UP000014154 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 106HTH araC/xylS-typeInterPro annotationAdd BLAST99

Phylogenomic databases

OrthoDBiPOG091H035N

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029441 Cass2
IPR009057 Homeobox-like_sf
IPR018060 HTH_AraC
IPR011256 Reg_factor_effector_dom_sf
IPR020449 Tscrpt_reg_HTH_AraC-type
PfamiView protein in Pfam
PF14526 Cass2, 1 hit
PF12833 HTH_18, 1 hit
PRINTSiPR00032 HTHARAC
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SM00342 HTH_ARAC, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
SSF55136 SSF55136, 1 hit
PROSITEiView protein in PROSITE
PS01124 HTH_ARAC_FAMILY_2, 1 hit

Sequencei

Sequence statusi: Complete.

R9LTX0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDWVTGIQHA INYVEEHLTE KIDYDKVAEE AACSSFYFQR IFGILCGMTL
60 70 80 90 100
GEYIRNRRLT LAGNELSATD EKVIDIALKY GYESPESFTR AFIKFHGVTP
110 120 130 140 150
SQAKKDGSKL KYFSRLSVQI TLNGGSMMNY KIIEKKAFDI IEKAERHTVD
160 170 180 190 200
NSENKKSIPD FWTRSHNDGT IKKLLDATTD KTYIFGVCYG NLPENARTFD
210 220 230 240 250
YSIAAKCSEN TIVPEGFRKN TIPARTWAVF ECKGAMPDAI QEMWHKIVSE
260 270 280
FFPASDYQPT YEMDIEAYTE GNMSSPDYRS EIWIPVMKK
Length:289
Mass (Da):33,109
Last modified:July 24, 2013 - v1
Checksum:i376107B7F18D5F94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ASTB01000013 Genomic DNA Translation: EOS61761.1
RefSeqiWP_016318542.1, NZ_KE159681.1

Genome annotation databases

EnsemblBacteriaiEOS61761; EOS61761; C815_00461
PATRICifig|1235796.3.peg.464

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ASTB01000013 Genomic DNA Translation: EOS61761.1
RefSeqiWP_016318542.1, NZ_KE159681.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEOS61761; EOS61761; C815_00461
PATRICifig|1235796.3.peg.464

Phylogenomic databases

OrthoDBiPOG091H035N

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029441 Cass2
IPR009057 Homeobox-like_sf
IPR018060 HTH_AraC
IPR011256 Reg_factor_effector_dom_sf
IPR020449 Tscrpt_reg_HTH_AraC-type
PfamiView protein in Pfam
PF14526 Cass2, 1 hit
PF12833 HTH_18, 1 hit
PRINTSiPR00032 HTHARAC
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SM00342 HTH_ARAC, 1 hit
SUPFAMiSSF46689 SSF46689, 2 hits
SSF55136 SSF55136, 1 hit
PROSITEiView protein in PROSITE
PS01124 HTH_ARAC_FAMILY_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiR9LTX0_9FIRM
AccessioniPrimary (citable) accession number: R9LTX0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: September 12, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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