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Entry version 29 (10 Feb 2021)
Sequence version 1 (24 Jul 2013)
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Protein

ALMS_motif domain-containing protein

Gene

CAPTEDRAFT_229158

Organism
Capitella teleta (Polychaete worm)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
ALMS_motif domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CAPTEDRAFT_229158Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCapitella teleta (Polychaete worm)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri283909 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaSpiraliaLophotrochozoaAnnelidaPolychaetaSedentariaScolecidaCapitellidaeCapitella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000014760 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, CytoskeletonARBA annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1777 – 1902ALMS_motifInterPro annotationAdd BLAST126

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 40DisorderedSequence analysisAdd BLAST40
Regioni186 – 230DisorderedSequence analysisAdd BLAST45
Regioni242 – 275DisorderedSequence analysisAdd BLAST34
Regioni292 – 354DisorderedSequence analysisAdd BLAST63
Regioni363 – 382DisorderedSequence analysisAdd BLAST20
Regioni405 – 425DisorderedSequence analysisAdd BLAST21
Regioni479 – 509DisorderedSequence analysisAdd BLAST31
Regioni569 – 605DisorderedSequence analysisAdd BLAST37
Regioni835 – 882DisorderedSequence analysisAdd BLAST48
Regioni918 – 947DisorderedSequence analysisAdd BLAST30
Regioni967 – 1039DisorderedSequence analysisAdd BLAST73
Regioni1070 – 1472DisorderedSequence analysisAdd BLAST403
Regioni1574 – 1614DisorderedSequence analysisAdd BLAST41
Regioni1670 – 1691DisorderedSequence analysisAdd BLAST22

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1503 – 1523Sequence analysisAdd BLAST21
Coiled coili1869 – 1889Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi252 – 275PolarSequence analysisAdd BLAST24
Compositional biasi292 – 310PolarSequence analysisAdd BLAST19
Compositional biasi571 – 589PolarSequence analysisAdd BLAST19
Compositional biasi840 – 864PolyampholyteSequence analysisAdd BLAST25
Compositional biasi867 – 882PolarSequence analysisAdd BLAST16
Compositional biasi932 – 947PolyampholyteSequence analysisAdd BLAST16
Compositional biasi993 – 1015PolyampholyteSequence analysisAdd BLAST23
Compositional biasi1016 – 1037PolarSequence analysisAdd BLAST22
Compositional biasi1104 – 1122PolarSequence analysisAdd BLAST19
Compositional biasi1129 – 1163PolarSequence analysisAdd BLAST35
Compositional biasi1185 – 1267PolyampholyteSequence analysisAdd BLAST83
Compositional biasi1307 – 1323PolyampholyteSequence analysisAdd BLAST17
Compositional biasi1353 – 1380PolyampholyteSequence analysisAdd BLAST28
Compositional biasi1381 – 1401PolarSequence analysisAdd BLAST21
Compositional biasi1402 – 1416PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1436 – 1458PolarSequence analysisAdd BLAST23
Compositional biasi1591 – 1609PolyampholyteSequence analysisAdd BLAST19

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_235643_0_0_1

Identification of Orthologs from Complete Genome Data

More...
OMAi
FRATIAC

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR029299, ALMS_motif

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15309, ALMS_motif, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

R7UQH0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEIEVSLAEE NSELTQHAIS DVMSPERPSF REEPLGKEPS PVHAVIDEQN
60 70 80 90 100
EEIGSSAAPS SVECRPISPI GQLHYEEETV VEDLINEPIS TLTSPEKTTE
110 120 130 140 150
LSQHLVQSNM TEDVELSQHV NELLKGNERS GSSVWMSRPG TVIERQNPNA
160 170 180 190 200
LPIAESEYSH SLDFHAESID VQPIVDSRIS IGDTIVHTQK PPIISSTPAM
210 220 230 240 250
QKEDSRDKSD SGRASTDSGG FGGSKEEREM KEMLNVLKTD IESYSVPRDK
260 270 280 290 300
PRVGSASSNA SSKESGVASR CTQDNEKTVV FSQIPADSSV VSNVQDSFSS
310 320 330 340 350
PPQHVPRNTG DSLGQKVAAL LGHAPPPKDA DSYVDSSNSA VANSTRESER
360 370 380 390 400
EDIERITSQY RSLLRDEADG SGPIELNTSE ESSVNIPAQI EPEVVNVVIE
410 420 430 440 450
GKTEHSVHSV HSEGEASSAE SEDGINRDVK SILMKYGHAF SDSENEVDRS
460 470 480 490 500
FGMNRMDEKN FSKKIEDLVM GPGGDSLLGP LQAYDDPAKS MSLPNLADTS
510 520 530 540 550
AESNTDVKRK LDVQESEDEL GHRVRDILCN TSHLRKAKAE SKASSIASSI
560 570 580 590 600
DFGALEKDLN EIRVELDSLK SDSSSQKSGS SSYHNLPRAQ GSSDVEDVVE
610 620 630 640 650
DEPLRESNRP LVNLGVDPLL TSGVIPLDLA LEIVHSGNYD SSGRPKVSLD
660 670 680 690 700
GSLASQRFHN QSRVDSSIND VLENEECLVD SEVEDVIDQS RPPTAASGQS
710 720 730 740 750
LSERVQNILE RNSPPRQAYQ YLEEANRQQE RLMDRSDHEQ SLDILKGALQ
760 770 780 790 800
SKDASYSVSP FRHMTPFNKL EGMRDLFSNK VQSMKQVEAP SIDVFTATAQ
810 820 830 840 850
EKREEFEREF DMRRQHIEHQ QKIVEEEILQ AALNRATPTD ARLREIEEPR
860 870 880 890 900
SSPTLWKEPP KKTEDGATGG ATSSPSGLNT FDSGRLAALE SRQSPTLIPY
910 920 930 940 950
KFLTSEGVTP DYGFYFSTNR GACPGSPDEK TPSGTRTRED LEKSHRFQVQ
960 970 980 990 1000
ERSFKKAETW VNGNFSPGAF EGSAAKGEKK ASSGGSVEDI LSETSEQKFD
1010 1020 1030 1040 1050
FGTPKKAERT SDEKMAYTST SDYHSAGQFS SLQAPVKESA IRKQREEVMR
1060 1070 1080 1090 1100
KFGYTKPLYA SGSTFDSAER FEALPSDKQA PPDAYDEPAR LSHAMDGLHG
1110 1120 1130 1140 1150
FSAYADQSTD QSDNSVNTNE LLARIRGRSP PSPSQTSPSF KTLSPIPLES
1160 1170 1180 1190 1200
RETFLRSTSP SLPRIRPRSP PYHLIPGPDG PADDISLEQH FEELPGEDVE
1210 1220 1230 1240 1250
IPLPSRRESR REEDWVERRP VSPERRPVSP GPKRRPVSPG PERRPVSPER
1260 1270 1280 1290 1300
RPVSPGPEKR SVSPERRPAS PERNLSVKFP NVVECSPDVI RKSPSRETFR
1310 1320 1330 1340 1350
SVDTSGQDSV REIRDREYHR LLETAQKLTG GESPEMRLPR NMEAAWQRFQ
1360 1370 1380 1390 1400
EQRRSLELSR ERRSMDSSKN SAKDISTDRS ADQASDTSLS QRKNTTSEVS
1410 1420 1430 1440 1450
EASSAKEKER PDASGGPQHP RKMAWIIKDE TLASVPEDST LESVTSDLTT
1460 1470 1480 1490 1500
SSEVDSDGKV ITRTSRKHLP DDPKLLKLQR KIAQQREKHR LDRHKEMHRQ
1510 1520 1530 1540 1550
EKIQTMERLL RAQERALRDL QRQSDVSSST LTGSDITDAS TTLSLNETPY
1560 1570 1580 1590 1600
IEDEPIREEF ERPAALQLQQ VDYSRTERAP RRKHTSAAKR ATSKKNKENE
1610 1620 1630 1640 1650
ERKICKETQN QGTRGEMKVI KDRNNADVYI KRASTQDFGA TCPTPVPEQS
1660 1670 1680 1690 1700
PKRKYNTISM ISEGVQTVPL REDPPRLMSP SRRSHGTSPN RAENLHMFIP
1710 1720 1730 1740 1750
EAALKKRHKA PSRRQKPKPA VSWFVPVVKR NPPFKERQNE TPAKFGSWIL
1760 1770 1780 1790 1800
TEEDMKPALD QQRPSLPKRE LKSKNMTSLQ EAFERNKREF ISASRERQKH
1810 1820 1830 1840 1850
VAIRAEERRV QELHQLERAK LFGFVPRKQA NRDAHPISEH LFKPKQRFMT
1860 1870 1880 1890 1900
RQEMKEMTQR KYKKLPEVVR AAEDRKRTEQ YRLNRLRAKL YQKKIQNMAL

KKPGPWLKA
Length:1,909
Mass (Da):214,111
Last modified:July 24, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDDCCA4CD40EDF01A
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AMQN01006769 Genomic DNA No translation available.
KB299094 Genomic DNA Translation: ELU08440.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
CapteT229158; CapteP229158; CapteG229158

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMQN01006769 Genomic DNA No translation available.
KB299094 Genomic DNA Translation: ELU08440.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblMetazoaiCapteT229158; CapteP229158; CapteG229158

Phylogenomic databases

HOGENOMiCLU_235643_0_0_1
OMAiFRATIAC

Family and domain databases

InterProiView protein in InterPro
IPR029299, ALMS_motif
PfamiView protein in Pfam
PF15309, ALMS_motif, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiR7UQH0_CAPTE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: R7UQH0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: February 10, 2021
This is version 29 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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