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UniProtKB - R7UQH0 (R7UQH0_CAPTE)

Entry version 29 (10 Feb 2021)
Sequence version 1 (24 Jul 2013)
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Protein

ALMS_motif domain-containing protein

Gene

CAPTEDRAFT_229158

Organism
Capitella teleta (Polychaete worm)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
ALMS_motif domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CAPTEDRAFT_229158Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCapitella teleta (Polychaete worm)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri283909 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Annelida › Polychaeta › Sedentaria › Scolecida › Capitellidae › Capitella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000014760 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, CytoskeletonARBA annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1777 – 1902ALMS_motifInterPro annotationAdd BLAST126

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 40DisorderedSequence analysisAdd BLAST40
Regioni186 – 230DisorderedSequence analysisAdd BLAST45
Regioni242 – 275DisorderedSequence analysisAdd BLAST34
Regioni292 – 354DisorderedSequence analysisAdd BLAST63
Regioni363 – 382DisorderedSequence analysisAdd BLAST20
Regioni405 – 425DisorderedSequence analysisAdd BLAST21
Regioni479 – 509DisorderedSequence analysisAdd BLAST31
Regioni569 – 605DisorderedSequence analysisAdd BLAST37
Regioni835 – 882DisorderedSequence analysisAdd BLAST48
Regioni918 – 947DisorderedSequence analysisAdd BLAST30
Regioni967 – 1039DisorderedSequence analysisAdd BLAST73
Regioni1070 – 1472DisorderedSequence analysisAdd BLAST403
Regioni1574 – 1614DisorderedSequence analysisAdd BLAST41
Regioni1670 – 1691DisorderedSequence analysisAdd BLAST22

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1503 – 1523Sequence analysisAdd BLAST21
Coiled coili1869 – 1889Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi252 – 275PolarSequence analysisAdd BLAST24
Compositional biasi292 – 310PolarSequence analysisAdd BLAST19
Compositional biasi571 – 589PolarSequence analysisAdd BLAST19
Compositional biasi840 – 864PolyampholyteSequence analysisAdd BLAST25
Compositional biasi867 – 882PolarSequence analysisAdd BLAST16
Compositional biasi932 – 947PolyampholyteSequence analysisAdd BLAST16
Compositional biasi993 – 1015PolyampholyteSequence analysisAdd BLAST23
Compositional biasi1016 – 1037PolarSequence analysisAdd BLAST22
Compositional biasi1104 – 1122PolarSequence analysisAdd BLAST19
Compositional biasi1129 – 1163PolarSequence analysisAdd BLAST35
Compositional biasi1185 – 1267PolyampholyteSequence analysisAdd BLAST83
Compositional biasi1307 – 1323PolyampholyteSequence analysisAdd BLAST17
Compositional biasi1353 – 1380PolyampholyteSequence analysisAdd BLAST28
Compositional biasi1381 – 1401PolarSequence analysisAdd BLAST21
Compositional biasi1402 – 1416PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1436 – 1458PolarSequence analysisAdd BLAST23
Compositional biasi1591 – 1609PolyampholyteSequence analysisAdd BLAST19

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_235643_0_0_1

Identification of Orthologs from Complete Genome Data

More...OMAi		FRATIAC

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR029299, ALMS_motif

Pfam protein domain database

More...Pfami		View protein in Pfam
PF15309, ALMS_motif, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

R7UQH0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEIEVSLAEE NSELTQHAIS DVMSPERPSF REEPLGKEPS PVHAVIDEQN 
        60         70         80         90        100
EEIGSSAAPS SVECRPISPI GQLHYEEETV VEDLINEPIS TLTSPEKTTE 
       110        120        130        140        150
LSQHLVQSNM TEDVELSQHV NELLKGNERS GSSVWMSRPG TVIERQNPNA 
       160        170        180        190        200
LPIAESEYSH SLDFHAESID VQPIVDSRIS IGDTIVHTQK PPIISSTPAM 
       210        220        230        240        250
QKEDSRDKSD SGRASTDSGG FGGSKEEREM KEMLNVLKTD IESYSVPRDK 
       260        270        280        290        300
PRVGSASSNA SSKESGVASR CTQDNEKTVV FSQIPADSSV VSNVQDSFSS 
       310        320        330        340        350
PPQHVPRNTG DSLGQKVAAL LGHAPPPKDA DSYVDSSNSA VANSTRESER 
       360        370        380        390        400
EDIERITSQY RSLLRDEADG SGPIELNTSE ESSVNIPAQI EPEVVNVVIE 
       410        420        430        440        450
GKTEHSVHSV HSEGEASSAE SEDGINRDVK SILMKYGHAF SDSENEVDRS 
       460        470        480        490        500
FGMNRMDEKN FSKKIEDLVM GPGGDSLLGP LQAYDDPAKS MSLPNLADTS 
       510        520        530        540        550
AESNTDVKRK LDVQESEDEL GHRVRDILCN TSHLRKAKAE SKASSIASSI 
       560        570        580        590        600
DFGALEKDLN EIRVELDSLK SDSSSQKSGS SSYHNLPRAQ GSSDVEDVVE 
       610        620        630        640        650
DEPLRESNRP LVNLGVDPLL TSGVIPLDLA LEIVHSGNYD SSGRPKVSLD 
       660        670        680        690        700
GSLASQRFHN QSRVDSSIND VLENEECLVD SEVEDVIDQS RPPTAASGQS 
       710        720        730        740        750
LSERVQNILE RNSPPRQAYQ YLEEANRQQE RLMDRSDHEQ SLDILKGALQ 
       760        770        780        790        800
SKDASYSVSP FRHMTPFNKL EGMRDLFSNK VQSMKQVEAP SIDVFTATAQ 
       810        820        830        840        850
EKREEFEREF DMRRQHIEHQ QKIVEEEILQ AALNRATPTD ARLREIEEPR 
       860        870        880        890        900
SSPTLWKEPP KKTEDGATGG ATSSPSGLNT FDSGRLAALE SRQSPTLIPY 
       910        920        930        940        950
KFLTSEGVTP DYGFYFSTNR GACPGSPDEK TPSGTRTRED LEKSHRFQVQ 
       960        970        980        990       1000
ERSFKKAETW VNGNFSPGAF EGSAAKGEKK ASSGGSVEDI LSETSEQKFD 
      1010       1020       1030       1040       1050
FGTPKKAERT SDEKMAYTST SDYHSAGQFS SLQAPVKESA IRKQREEVMR 
      1060       1070       1080       1090       1100
KFGYTKPLYA SGSTFDSAER FEALPSDKQA PPDAYDEPAR LSHAMDGLHG 
      1110       1120       1130       1140       1150
FSAYADQSTD QSDNSVNTNE LLARIRGRSP PSPSQTSPSF KTLSPIPLES 
      1160       1170       1180       1190       1200
RETFLRSTSP SLPRIRPRSP PYHLIPGPDG PADDISLEQH FEELPGEDVE 
      1210       1220       1230       1240       1250
IPLPSRRESR REEDWVERRP VSPERRPVSP GPKRRPVSPG PERRPVSPER 
      1260       1270       1280       1290       1300
RPVSPGPEKR SVSPERRPAS PERNLSVKFP NVVECSPDVI RKSPSRETFR 
      1310       1320       1330       1340       1350
SVDTSGQDSV REIRDREYHR LLETAQKLTG GESPEMRLPR NMEAAWQRFQ 
      1360       1370       1380       1390       1400
EQRRSLELSR ERRSMDSSKN SAKDISTDRS ADQASDTSLS QRKNTTSEVS 
      1410       1420       1430       1440       1450
EASSAKEKER PDASGGPQHP RKMAWIIKDE TLASVPEDST LESVTSDLTT 
      1460       1470       1480       1490       1500
SSEVDSDGKV ITRTSRKHLP DDPKLLKLQR KIAQQREKHR LDRHKEMHRQ 
      1510       1520       1530       1540       1550
EKIQTMERLL RAQERALRDL QRQSDVSSST LTGSDITDAS TTLSLNETPY 
      1560       1570       1580       1590       1600
IEDEPIREEF ERPAALQLQQ VDYSRTERAP RRKHTSAAKR ATSKKNKENE 
      1610       1620       1630       1640       1650
ERKICKETQN QGTRGEMKVI KDRNNADVYI KRASTQDFGA TCPTPVPEQS 
      1660       1670       1680       1690       1700
PKRKYNTISM ISEGVQTVPL REDPPRLMSP SRRSHGTSPN RAENLHMFIP 
      1710       1720       1730       1740       1750
EAALKKRHKA PSRRQKPKPA VSWFVPVVKR NPPFKERQNE TPAKFGSWIL 
      1760       1770       1780       1790       1800
TEEDMKPALD QQRPSLPKRE LKSKNMTSLQ EAFERNKREF ISASRERQKH 
      1810       1820       1830       1840       1850
VAIRAEERRV QELHQLERAK LFGFVPRKQA NRDAHPISEH LFKPKQRFMT 
      1860       1870       1880       1890       1900
RQEMKEMTQR KYKKLPEVVR AAEDRKRTEQ YRLNRLRAKL YQKKIQNMAL 

KKPGPWLKA
Length:1,909
Mass (Da):214,111
Last modified:July 24, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDDCCA4CD40EDF01A
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AMQN01006769 Genomic DNA No translation available.
KB299094 Genomic DNA Translation: ELU08440.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...EnsemblMetazoai		CapteT229158; CapteP229158; CapteG229158

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMQN01006769 Genomic DNA No translation available.
KB299094 Genomic DNA Translation: ELU08440.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblMetazoaiCapteT229158; CapteP229158; CapteG229158

Phylogenomic databases

HOGENOMiCLU_235643_0_0_1
OMAiFRATIAC

Family and domain databases

InterProiView protein in InterPro
IPR029299, ALMS_motif
PfamiView protein in Pfam
PF15309, ALMS_motif, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiR7UQH0_CAPTE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: R7UQH0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: February 10, 2021
This is version 29 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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