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Protein
Submitted name:

Uncharacterized protein

Gene

CARUB_v10008098mg

Organism
Capsella rubella
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi454 – 461ATPPROSITE-ProRule annotation8
Nucleotide bindingi1114 – 1121ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CARUB_v10008098mgImported
OrganismiCapsella rubellaImported
Taxonomic identifieri81985 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeCapsella
Proteomesi
  • UP000029121 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei93 – 117HelicalSequence analysisAdd BLAST25
Transmembranei144 – 165HelicalSequence analysisAdd BLAST22
Transmembranei220 – 236HelicalSequence analysisAdd BLAST17
Transmembranei242 – 263HelicalSequence analysisAdd BLAST22
Transmembranei323 – 345HelicalSequence analysisAdd BLAST23
Transmembranei754 – 778HelicalSequence analysisAdd BLAST25
Transmembranei798 – 825HelicalSequence analysisAdd BLAST28
Transmembranei891 – 914HelicalSequence analysisAdd BLAST24
Transmembranei980 – 999HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini99 – 384ABC transmembrane type-1InterPro annotationAdd BLAST286
Domaini419 – 655ABC transporterInterPro annotationAdd BLAST237
Domaini758 – 1044ABC transmembrane type-1InterPro annotationAdd BLAST287
Domaini1079 – 1318ABC transporterInterPro annotationAdd BLAST240

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK05658

Family and domain databases

Gene3Di1.20.1560.10, 3 hits
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00664 ABC_membrane, 2 hits
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
SSF90123 SSF90123, 2 hits
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 2 hits
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Fragment.

R0ICY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
FQDNNNTASL TSVLFPQSFK SFTLFRSFSP HLLSAPEMNR DGAGEGDSVS
60 70 80 90 100
HEPSTSKSPK EGEEEETKKE KNDEKTKTVP FYKLFAFADS VDVFLMICGS
110 120 130 140 150
IGAIGNGVCL PLMTLLFGDL IDSFGKNQNS EDIVDVVSKV CLKFVYLGLG
160 170 180 190 200
TLGAAFLQVA CWMITGERQA ARIRSTYLKT ILRQDIGFFD VETNTGEVVG
210 220 230 240 250
RMSGDTVLIQ DAMGEKVGKF IQLISTFVGG FVLAFIKGWL LTLVMLTSIP
260 270 280 290 300
LLAMAGAAMA LIVTRASSRG QAAYAKAATV VEQTIGSIRT VASFTGEKQA
310 320 330 340 350
INSYKKFITS AYKSSIQQGF STGLGLGIMF FVFFSSYALA IWFGGKMIIE
360 370 380 390 400
KGYTGGAVIN VIIIVVAGSM SLGQTSPCVT AFAAGQAAAY KMFETIKRKP
410 420 430 440 450
LIDAYDVNGK VPEDIRGDIE LKDVHFSYPA RPDEDIFHGF SLFIPSGATA
460 470 480 490 500
ALVGESGSGK STVISLIERF YDPKAGEVLI DGVNLKEFQL KWIRSKIGLV
510 520 530 540 550
SQEPVLFTSS IMENIAYGKE NATLQEIKAA TELANAAKFI DKLPQGLDTM
560 570 580 590 600
VGEHGTQLSG GQKQRIAIAR AILKDPRILL LDEATSALDA ESERVVQEAL
610 620 630 640 650
DRVMVNRTTV IVAHRLSTVR NADMIAVIHR GKMVEKGSHS ELLKDFEGAY
660 670 680 690 700
SQLIRLQEIN KGQDAKPSDI SSGSSFRNSN LKKSMEGSVI SGGNSSVGNS
710 720 730 740 750
SRHHSLNVLG LSAGLDLGNT SQRVVGHEET GTAGQEPPPK VSLSRIAALN
760 770 780 790 800
KPEIPVLLLG TVAAAINGTI FPLFGILISR VIEAFFKPAD QLKKDSRFWA
810 820 830 840 850
IIYVALGVTS LIVSPTQMYL FAVAGGKLIQ RIRSMCFEKA VHMEVSWFDE
860 870 880 890 900
PQNSSGTMGA RLSADAALIR ALVGDALSLA VQNAASAASG LIIAFTASWE
910 920 930 940 950
LALIILVMLP LIGINGFVQV KFMKGFSADA KSKYEEASQV ANDAVGSIRT
960 970 980 990 1000
VASFCAEEKV MQMYKKQCEG PIKDGIKQGF ISGLGFGFSF FILFCVYATS
1010 1020 1030 1040 1050
FYAGARLVED GKITFNDVFQ VFFALTMAAI GVSQSSSLAP DSSKAKVAAA
1060 1070 1080 1090 1100
SIFAIIDRKS KIDSSDESGT VLENVKGDIE LRHLRFTYPA RPDIQIFRDL
1110 1120 1130 1140 1150
CLTIRAGKTV ALVGESGSGK STVISLLQRF YDPDSGHITL DGVELKKLQL
1160 1170 1180 1190 1200
KWLRQQMGLV GQEPVLFNDT IRANIAYGKG SENAATESEI IAAAELANAH
1210 1220 1230 1240 1250
KFISSIQQGY DTVVGERGIQ LSGGQKQRVA IARAIVKEPK ILLLDEATSA
1260 1270 1280 1290 1300
LDAESERVVQ DALDRVMVNR TTIVVAHRLS TIKNADVIAV VKNGVIAEKG
1310 1320
THETLIKIDG GVYASLVQLH MTASN
Length:1,325
Mass (Da):142,722
Last modified:June 26, 2013 - v1
Checksum:iD1DA33E82EE96173
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB870805 Genomic DNA Translation: EOA36035.1
RefSeqiXP_006303137.1, XM_006303075.1

Genome annotation databases

GeneIDi17897271
KEGGicrb:17897271

Similar proteinsi

Entry informationi

Entry nameiR0ICY7_9BRAS
AccessioniPrimary (citable) accession number: R0ICY7
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: June 20, 2018
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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