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Protein
Submitted name:

Uncharacterized protein

Gene

CARUB_v10004929mg

Organism
Capsella rubella
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CARUB_v10004929mgImported
OrganismiCapsella rubellaImported
Taxonomic identifieri81985 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeCapsella
Proteomesi
  • UP000029121 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei391 – 409HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK00801

Family and domain databases

CDDicd00683 Trans_IPPS_HH, 1 hit
Gene3Di1.10.600.10, 1 hit
InterProiView protein in InterPro
IPR008949 Isoprenoid_synthase_dom_sf
IPR002060 Squ/phyt_synthse
IPR006449 Squal_synth-like
IPR019845 Squalene/phytoene_synthase_CS
IPR033904 Trans_IPPS_HH
PfamiView protein in Pfam
PF00494 SQS_PSY, 1 hit
SUPFAMiSSF48576 SSF48576, 1 hit
TIGRFAMsiTIGR01559 squal_synth, 1 hit
PROSITEiView protein in PROSITE
PS01044 SQUALEN_PHYTOEN_SYN_1, 1 hit
PS01045 SQUALEN_PHYTOEN_SYN_2, 1 hit

Sequencei

Sequence statusi: Complete.

R0F5H9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSLGTMLRY PDDIFPLLKM KRAIEKAEKQ IPPEPHWGFC YSMLHKVSRS
60 70 80 90 100
FSLVIQQLNT ELRNAVCVFY LVLRALDTVE DDTSIPTDEK VPILIAFHQH
110 120 130 140 150
IYNTDWHYSC GTKEYKVLMD QFHHVAAAFL ELEKGYQEAI EEITKRMGAG
160 170 180 190 200
MAKFICQEVE TVDDYDEYCH YVAGLVGLGL SKLFLAAGTE VLTPDWEAIS
210 220 230 240 250
NSMGLFLQKT NIIRDYLEDI NEIPKSRMFW PREIWGKYAD KLEDLKYEEN
260 270 280 290 300
STKSVQCLNE MVTNALMHIE DCLKYMAALR DPSIFRFCAI PQIMAIGTLA
310 320 330 340 350
LCYNNVQLFR GVVKLRRGLT AKVIDRTKTM ADVYGAFYDF SCMLKTKVDK
360 370 380 390 400
NDPNGSKTLN RLEAVQKLCR DSGVLNNRKS YVDDKGQPNN VFIIMVVILL
410
AIVFAYLRAN RVME
Length:414
Mass (Da):47,497
Last modified:June 26, 2013 - v1
Checksum:iB3EE6C0C316C6164
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB870811 Genomic DNA Translation: EOA16726.1
RefSeqiXP_006283828.1, XM_006283766.1

Genome annotation databases

GeneIDi17877456
KEGGicrb:17877456

Similar proteinsi

Entry informationi

Entry nameiR0F5H9_9BRAS
AccessioniPrimary (citable) accession number: R0F5H9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: June 20, 2018
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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