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Protein
Submitted name:

Uncharacterized protein

Gene

CARUB_v10004562mg

Organism
Capsella rubella
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi11 – 103TF-B3PROSITE-ProRule annotationAdd BLAST93
DNA bindingi144 – 241TF-B3PROSITE-ProRule annotationAdd BLAST98
DNA bindingi295 – 392TF-B3PROSITE-ProRule annotationAdd BLAST98
DNA bindingi426 – 522TF-B3PROSITE-ProRule annotationAdd BLAST97

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CARUB_v10004562mgImported
OrganismiCapsella rubellaImported
Taxonomic identifieri81985 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeCapsella
Proteomesi
  • UP000029121 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 103TF-B3InterPro annotationAdd BLAST93
Domaini144 – 241TF-B3InterPro annotationAdd BLAST98
Domaini295 – 392TF-B3InterPro annotationAdd BLAST98
Domaini426 – 522TF-B3InterPro annotationAdd BLAST97

Family and domain databases

CDDicd10017 B3_DNA, 4 hits
Gene3Di2.40.330.10, 4 hits
InterProiView protein in InterPro
IPR003340 B3_DNA-bd
IPR015300 DNA-bd_pseudobarrel_sf
IPR039218 REM_fam
PANTHERiPTHR31674 PTHR31674, 3 hits
PfamiView protein in Pfam
PF02362 B3, 4 hits
SMARTiView protein in SMART
SM01019 B3, 4 hits
SUPFAMiSSF101936 SSF101936, 4 hits
PROSITEiView protein in PROSITE
PS50863 B3, 4 hits

Sequencei

Sequence statusi: Complete.

R0F3W1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADSVLFSSA KPHFFKPILP GFNTSILIPE AFYSNYLEGR QEGNTAELRS
60 70 80 90 100
DMSEMTWIIK MDGRRLSKGW EKFAEAHNLQ VGDILVFRHE GNLLFHVTTF
110 120 130 140 150
GQSSCEIRYS YSSQKDDKDV KDKTGKVTTV KKTARNECSS VDTDFVVPVT
160 170 180 190 200
ASNQRLDSVC LPRGFTNSSG LSKLCNEMIL MDEKGRPSKI KLCYKESTNR
210 220 230 240 250
FCASRGWRAF CCKNGHQTGC FLRLILVRNG KTPVLRVFPL ERDEDNIAKC
260 270 280 290 300
SKKTNQEVEH ESVKEEMKVD SGKLIRDRLV KKDPKSLCSS SHDTSFVVPV
310 320 330 340 350
TASNQRLDSF NLPKGLTTSS GLSKLCKEIV FMDERGRTSI LNLSYDKSSC
360 370 380 390 400
RFKVRRGWRA FCCRNGHEIG SFLKLILVRN GKTPILRIFP LEKDEGSIGK
410 420 430 440 450
NSQNIKQEVE HESAKAESLS LSDNSCFVVS VTVSNLREDR LYLPVRLSRS
460 470 480 490 500
NILKGKFHEI NLMNKHGRTW TLSLKYSKCS RKFSISRGWK CFCEANGQKP
510 520 530
GCTFLFKLVR NRKAPVLLMT SLDGNTHQSK TGL
Length:533
Mass (Da):60,351
Last modified:June 26, 2013 - v1
Checksum:i52B395A96C331DCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB870811 Genomic DNA Translation: EOA16407.1
RefSeqiXP_006283509.1, XM_006283447.1

Genome annotation databases

GeneIDi17878198
KEGGicrb:17878198

Similar proteinsi

Entry informationi

Entry nameiR0F3W1_9BRAS
AccessioniPrimary (citable) accession number: R0F3W1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: July 18, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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