UniProtKB - Q9ZVI3 (QKIL3_ARATH)
Protein
KH domain-containing protein At2g38610
Gene
At2g38610
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
GO - Molecular functioni
- mRNA binding Source: TAIR
GO - Biological processi
- regulation of mRNA splicing, via spliceosome Source: GO_Central
Keywordsi
Molecular function | RNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: KH domain-containing protein At2g38610Alternative name(s): Quaking-like protein 3 |
Gene namesi | Ordered Locus Names:At2g38610 ORF Names:T6A23.19 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT2G38610 |
TAIRi | locus:2064097, AT2G38610 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Initiator methioninei | RemovedCombined sources | |||
ChainiPRO_0000357030 | 2 – 286 | KH domain-containing protein At2g38610Add BLAST | 285 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 2 | N-acetylserineCombined sources | 1 | |
Modified residuei | 263 | PhosphoserineCombined sources | 1 | |
Modified residuei | 273 | PhosphoserineCombined sources | 1 |
Keywords - PTMi
Acetylation, PhosphoproteinProteomic databases
PaxDbi | Q9ZVI3 |
PRIDEi | Q9ZVI3 |
ProteomicsDBi | 225935 |
PTM databases
iPTMneti | Q9ZVI3 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9ZVI3, baseline and differential |
Genevisiblei | Q9ZVI3, AT |
Interactioni
Binary interactionsi
Q9ZVI3
With | #Exp. | IntAct |
---|---|---|
UBA1A [Q9SHZ6] | 3 | EBI-4440478,EBI-346271 |
Protein-protein interaction databases
BioGRIDi | 3785, 4 interactors |
IntActi | Q9ZVI3, 4 interactors |
STRINGi | 3702.AT2G38610.1 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 141 – 208 | KHAdd BLAST | 68 |
Phylogenomic databases
eggNOGi | KOG1588, Eukaryota |
HOGENOMi | CLU_065679_0_1_1 |
InParanoidi | Q9ZVI3 |
OMAi | QMGGMRT |
OrthoDBi | 1565749at2759 |
PhylomeDBi | Q9ZVI3 |
Family and domain databases
InterProi | View protein in InterPro IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR032377, STAR_dimer |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF16544, STAR_dimer, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q9ZVI3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSGLYNNSSY FSPARAASPQ IRSTPEIDSS QYLTELLAEH QKLTPFMQVL
60 70 80 90 100
PICSRLLNQE MFRVSGMMSN QGFGDFDRLR HRSPSPMASS NLMSNVSNTG
110 120 130 140 150
LGGWNGLSQE RLSGTPGMTM DWQGAPGSPS SYTVKRILRL EIPVDNYPNF
160 170 180 190 200
NFVGRLLGPR GNSLKRVEAT TGCRVFIRGK GSIKDPEKED KLRGRPGYEH
210 220 230 240 250
LNEQLHILIE ADLPASIVEI RLRQAQEIIE ELLKPVDESQ DFIKRQQLRE
260 270 280
LALLNSNNLR EESPGPSGGG SVSPFNSSGK RPKTGC
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005499 Genomic DNA Translation: AAC67357.1 CP002685 Genomic DNA Translation: AEC09555.1 CP002685 Genomic DNA Translation: AEC09556.1 AY042804 mRNA Translation: AAK68744.1 AY064682 mRNA Translation: AAL47387.1 AY065112 mRNA Translation: AAL38288.1 BT000084 mRNA Translation: AAN15403.1 |
PIRi | B84807 |
RefSeqi | NP_181395.1, NM_129418.3 NP_850296.1, NM_179965.4 |
Genome annotation databases
EnsemblPlantsi | AT2G38610.1; AT2G38610.1; AT2G38610 AT2G38610.2; AT2G38610.2; AT2G38610 |
GeneIDi | 818443 |
Gramenei | AT2G38610.1; AT2G38610.1; AT2G38610 AT2G38610.2; AT2G38610.2; AT2G38610 |
KEGGi | ath:AT2G38610 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005499 Genomic DNA Translation: AAC67357.1 CP002685 Genomic DNA Translation: AEC09555.1 CP002685 Genomic DNA Translation: AEC09556.1 AY042804 mRNA Translation: AAK68744.1 AY064682 mRNA Translation: AAL47387.1 AY065112 mRNA Translation: AAL38288.1 BT000084 mRNA Translation: AAN15403.1 |
PIRi | B84807 |
RefSeqi | NP_181395.1, NM_129418.3 NP_850296.1, NM_179965.4 |
3D structure databases
SMRi | Q9ZVI3 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 3785, 4 interactors |
IntActi | Q9ZVI3, 4 interactors |
STRINGi | 3702.AT2G38610.1 |
PTM databases
iPTMneti | Q9ZVI3 |
Proteomic databases
PaxDbi | Q9ZVI3 |
PRIDEi | Q9ZVI3 |
ProteomicsDBi | 225935 |
Genome annotation databases
EnsemblPlantsi | AT2G38610.1; AT2G38610.1; AT2G38610 AT2G38610.2; AT2G38610.2; AT2G38610 |
GeneIDi | 818443 |
Gramenei | AT2G38610.1; AT2G38610.1; AT2G38610 AT2G38610.2; AT2G38610.2; AT2G38610 |
KEGGi | ath:AT2G38610 |
Organism-specific databases
Araporti | AT2G38610 |
TAIRi | locus:2064097, AT2G38610 |
Phylogenomic databases
eggNOGi | KOG1588, Eukaryota |
HOGENOMi | CLU_065679_0_1_1 |
InParanoidi | Q9ZVI3 |
OMAi | QMGGMRT |
OrthoDBi | 1565749at2759 |
PhylomeDBi | Q9ZVI3 |
Miscellaneous databases
PROi | PR:Q9ZVI3 |
Gene expression databases
ExpressionAtlasi | Q9ZVI3, baseline and differential |
Genevisiblei | Q9ZVI3, AT |
Family and domain databases
InterProi | View protein in InterPro IPR004087, KH_dom IPR004088, KH_dom_type_1 IPR036612, KH_dom_type_1_sf IPR032377, STAR_dimer |
Pfami | View protein in Pfam PF00013, KH_1, 1 hit PF16544, STAR_dimer, 1 hit |
SMARTi | View protein in SMART SM00322, KH, 1 hit |
SUPFAMi | SSF54791, SSF54791, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | QKIL3_ARATH | |
Accessioni | Q9ZVI3Primary (citable) accession number: Q9ZVI3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | December 16, 2008 |
Last sequence update: | May 1, 1999 | |
Last modified: | April 7, 2021 | |
This is version 120 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names