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Protein

Probable WRKY transcription factor 3

Gene

WRKY3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi244 – 308WRKY 1PROSITE-ProRule annotationAdd BLAST65
DNA bindingi409 – 474WRKY 2PROSITE-ProRule annotationAdd BLAST66

GO - Molecular functioni

  • DNA-binding transcription factor activity Source: TAIR
  • sequence-specific DNA binding Source: InterPro

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable WRKY transcription factor 3
Alternative name(s):
WRKY DNA-binding protein 3
Gene namesi
Name:WRKY3
Ordered Locus Names:At2g03340
ORF Names:T4M8.23
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G03340
TAIRilocus:2063835 AT2G03340

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001336461 – 513Probable WRKY transcription factor 3Add BLAST513

Proteomic databases

PaxDbiQ9ZQ70
PRIDEiQ9ZQ70

PTM databases

iPTMnetiQ9ZQ70

Expressioni

Tissue specificityi

In young, mature and senescent leaves.1 Publication

Inductioni

By salicylic acid and during leaf senescence.2 Publications

Gene expression databases

ExpressionAtlasiQ9ZQ70 baseline and differential
GenevisibleiQ9ZQ70 AT

Interactioni

Protein-protein interaction databases

BioGridi265, 1 interactor
IntActiQ9ZQ70, 1 interactor
STRINGi3702.AT2G03340.1

Structurei

3D structure databases

ProteinModelPortaliQ9ZQ70
SMRiQ9ZQ70
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi74 – 82Poly-Ala9
Compositional biasi191 – 199Poly-Gln9

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG410IDX2 Eukaryota
ENOG410YBRT LUCA
HOGENOMiHOG000242409
InParanoidiQ9ZQ70
OMAiVATQFHT
OrthoDBiEOG09360DTW
PhylomeDBiQ9ZQ70

Family and domain databases

Gene3Di2.20.25.80, 2 hits
InterProiView protein in InterPro
IPR003657 WRKY_dom
IPR036576 WRKY_dom_sf
PfamiView protein in Pfam
PF03106 WRKY, 2 hits
SMARTiView protein in SMART
SM00774 WRKY, 2 hits
SUPFAMiSSF118290 SSF118290, 2 hits
PROSITEiView protein in PROSITE
PS50811 WRKY, 2 hits

Sequencei

Sequence statusi: Complete.

Q9ZQ70-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS
60 70 80 90 100
NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
110 120 130 140 150
GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP
160 170 180 190 200
LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
210 220 230 240 250
SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD
260 270 280 290 300
DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
310 320 330 340 350
GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE
360 370 380 390 400
QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
410 420 430 440 450
PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH
460 470 480 490 500
VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
510
PVARLRLKEE QIT
Length:513
Mass (Da):56,284
Last modified:May 1, 1999 - v1
Checksum:iF5042163E27EB8B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF224701 mRNA Translation: AAK28311.1
AC006284 Genomic DNA Translation: AAD17441.1
CP002685 Genomic DNA Translation: AEC05689.1
PIRiC84447
RefSeqiNP_178433.1, NM_126385.4
UniGeneiAt.23587

Genome annotation databases

EnsemblPlantsiAT2G03340.1; AT2G03340.1; AT2G03340
GeneIDi814863
GrameneiAT2G03340.1; AT2G03340.1; AT2G03340
KEGGiath:AT2G03340

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF224701 mRNA Translation: AAK28311.1
AC006284 Genomic DNA Translation: AAD17441.1
CP002685 Genomic DNA Translation: AEC05689.1
PIRiC84447
RefSeqiNP_178433.1, NM_126385.4
UniGeneiAt.23587

3D structure databases

ProteinModelPortaliQ9ZQ70
SMRiQ9ZQ70
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi265, 1 interactor
IntActiQ9ZQ70, 1 interactor
STRINGi3702.AT2G03340.1

PTM databases

iPTMnetiQ9ZQ70

Proteomic databases

PaxDbiQ9ZQ70
PRIDEiQ9ZQ70

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G03340.1; AT2G03340.1; AT2G03340
GeneIDi814863
GrameneiAT2G03340.1; AT2G03340.1; AT2G03340
KEGGiath:AT2G03340

Organism-specific databases

AraportiAT2G03340
TAIRilocus:2063835 AT2G03340

Phylogenomic databases

eggNOGiENOG410IDX2 Eukaryota
ENOG410YBRT LUCA
HOGENOMiHOG000242409
InParanoidiQ9ZQ70
OMAiVATQFHT
OrthoDBiEOG09360DTW
PhylomeDBiQ9ZQ70

Miscellaneous databases

PROiPR:Q9ZQ70

Gene expression databases

ExpressionAtlasiQ9ZQ70 baseline and differential
GenevisibleiQ9ZQ70 AT

Family and domain databases

Gene3Di2.20.25.80, 2 hits
InterProiView protein in InterPro
IPR003657 WRKY_dom
IPR036576 WRKY_dom_sf
PfamiView protein in Pfam
PF03106 WRKY, 2 hits
SMARTiView protein in SMART
SM00774 WRKY, 2 hits
SUPFAMiSSF118290 SSF118290, 2 hits
PROSITEiView protein in PROSITE
PS50811 WRKY, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiWRKY3_ARATH
AccessioniPrimary (citable) accession number: Q9ZQ70
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2002
Last sequence update: May 1, 1999
Last modified: November 7, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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