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Entry version 118 (31 Jul 2019)
Sequence version 1 (01 May 1999)
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Protein
Submitted name:

Uncharacterized protein At2g46560

Gene
N/A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized protein At2g46560Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9ZPY3 baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2371 – 2412WD_REPEATS_REGIONInterPro annotationAdd BLAST42
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati2371 – 2412WDPROSITE-ProRule annotationAdd BLAST42

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 23DisorderedSequence analysisAdd BLAST23
Regioni944 – 963DisorderedSequence analysisAdd BLAST20

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1297 – 1317Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi947 – 963PolarSequence analysisAdd BLAST17

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis, WD repeatPROSITE-ProRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1064 Eukaryota
ENOG410XPUM LUCA

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9ZPY3

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
2.130.10.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR022033 Rav1p_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12234 Rav1p_C, 1 hit
PF00400 WD40, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00320 WD40, 10 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978 SSF50978, 3 hits

PROSITE; a protein domain and family database

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PROSITEi
View protein in PROSITE
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9ZPY3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRYRIQLKPS GLERGSGDPR TDRIDHLPLR QLRSEIVPPA PTRSQSSIDW
60 70 80 90 100
LPDFANYSWL AYGASTLVVI SHLPSPLRGE DSTNGPFFRQ ILEVSGEPVT
110 120 130 140 150
AVCWSPVTPS VGELAVGSGN YIFLFARDLK GSFCWSQNAI LVQETIVEAI
160 170 180 190 200
EWTGSGDGII VGGTDIVLWK RRNQSWEIAW KFSGDHLQDL VSSTWSFEGP
210 220 230 240 250
FATATSWRKF PAECDDAGKS VLAYYSDGES YHNFELPHPQ RISMIQWRPM
260 270 280 290 300
AAEQSAIGIG KSMRNVLMTC CLDGAVRLWC EVDGGKTKKG MKDVPDHKKS
310 320 330 340 350
FCVAAVIEIN QVLDGCLGRD LFLFWGTRTG GIFKTIEGTN QVFSMEKYDN
360 370 380 390 400
ENVGKCEWLV GYGPGNFATL WAVHCLDDIS PMRFPRVTLW AKQESNEIGA
410 420 430 440 450
GSLSLASATG SSDRLPLKKV SVLRNNLYGT PLICSSIYLS PQNTVYWSSL
460 470 480 490 500
HTIKSHDSED SSPNKSSLLK CIDGKVLYLD GHGGKILQVA SDPFVCEAGY
510 520 530 540 550
TASLDSNGLI IICSSSVYLN RTIEHPISVA SWKPCGRLQN QEFRLKYTSL
560 570 580 590 600
CWAPSSLKDE RFLLVGHVGG VDCFSVRNCG KGDDGYLTHY ICTIPFTVNS
610 620 630 640 650
PLQSGPTSIF AKPLSNSCGK TFKSNRFLLL SVWMKEKRFD ALSWSVTLHH
660 670 680 690 700
FDTAGSTCDC HFHDFDSIGL GKWLFEDTFA GKTNCLAIRS CSSEIPESHR
710 720 730 740 750
EDEVTSFAVV NPSGRDLENG VNSESQAYTI ATGQADGSLK LWRSSFQESS
760 770 780 790 800
TPSGLWELVG MLTVGQNPVS AISLTDSGHK IAALCTESHS KAARAVSIWE
810 820 830 840 850
IVHLIDSGVF ILEDKVHVDA EVVAVRWSTT GNDQLLLGVC TQIEMRVYGI
860 870 880 890 900
ARQPCKSTSF AAYDYSSEAQ IWQCFAVTRT FSAIHDLWWG PKAMTCLVHN
910 920 930 940 950
DYISLHGQWL AVVDKKQKID NYPEIFASNL PNLVNATEEG RDSEFLSDSG
960 970 980 990 1000
TNDINEADTT STSRGCIPLP STSNAIDDGQ VNSMSLIGTA YGSNTIDDIM
1010 1020 1030 1040 1050
SMGHMVEKLG GALPLYHPHA LLVAIRSGNW KRASAALRHL AEYITSSDTS
1060 1070 1080 1090 1100
EKGYAVKSVL CPDILLSKYY EGSLSNGPNP KDFQWGGTSG SMLQYSQFQS
1110 1120 1130 1140 1150
GLQSKFNMES YSPNSPATDL EFSGFCEQLK KLSDEGNISR IEILQYFAIV
1160 1170 1180 1190 1200
DLLCEISNPH STSVYASLDE PGRRFWVTLR FKQLFLARSS GKTASLEELD
1210 1220 1230 1240 1250
IDSSMIGWAF HSESQENLSG SLLPNESSWQ QMRSQGFGFW YSNAAQLRSR
1260 1270 1280 1290 1300
MEKLARQQYL KNKNPKDCAL LYIALNRVQV LAGLFKLSKD EKDKPLVVFL
1310 1320 1330 1340 1350
SRNFQEEKNK AAALKNAYVL MGKHQLELAI GFFLLGGEAS SAINVCVKNL
1360 1370 1380 1390 1400
QDEQLALVIC RLIDGQGGAL ESNLIKKYIL PSAVQRGDFW LASLLKWELG
1410 1420 1430 1440 1450
EYHRSILAMA GCLENPATES STVSSNHVSF VDPSIGLYCL MLATKNSVKN
1460 1470 1480 1490 1500
ALGERTASTL SRWASLMAAT AFSRCGLPLE ALECLSPSAS GHGGTHQTSV
1510 1520 1530 1540 1550
PSNGQLHTTQ GVFDHSVPHS SNWVSSGVSS TVDTHFRLGL AVQFLSMILR
1560 1570 1580 1590 1600
EATAPLMNSE VVSCEKFSRF QHKLQTALEQ FHQRFSLSAS YLRNMMILSA
1610 1620 1630 1640 1650
YNRGLLSMGH NIFQENSSSG LSDDKSHTDE DLLQYSALSK LILKATDEKS
1660 1670 1680 1690 1700
LVLSRIIAAC SVTCLHSVPC FEENKVSSGP DPKWSNALRF YFQGILESFS
1710 1720 1730 1740 1750
NLRTSIRLCL GSSVEDLKTK LAVVLDLVEY CLRLAMAWVL GDVHCLFRMV
1760 1770 1780 1790 1800
QPLVISYFNG HMPYEVDLES VKRVYHQEAS VSVPDASDVG VNSKFSSVVE
1810 1820 1830 1840 1850
NHGVGYPVYS IPEDERCLVT QACFWKHVSD FVKLKLVSIS INLDDGISNS
1860 1870 1880 1890 1900
GSAENFDAQT SLDSSDDIVC VTEKIMSVLG KTLISTLAQL SSYHVKQLVL
1910 1920 1930 1940 1950
VLKQKLEKRL QVPTLLWLLE CQGSQANFLN RDIPDAGVET EKNGDPVVSV
1960 1970 1980 1990 2000
RFWKLCVDPH LLHEAFLLEN FDIFEWSKSK PLEDWSDMYR EVIRKNELYV
2010 2020 2030 2040 2050
PCNQDGRSSN EVASLANHAS NSSPKAAVTA NENSAFQNPK EIHKRTGELI
2060 2070 2080 2090 2100
EALCINAINH RQAALASNRK GIIFFNLEDG DSSQNQSDYI WSDADWPHNG
2110 2120 2130 2140 2150
WANSESTPVP TCVSLGVGLG DKKGAHLGLG VSGLGWETQE EFEEFVDPPP
2160 2170 2180 2190 2200
TVESVITRAF SNHPTMPLFL VGSSNTHIYL WEFGNERATA TYGVLPAANV
2210 2220 2230 2240 2250
SPPYALASIS AVQFGPFGHR FASAALDGTV CTWQSEVGGR SNIHPVESSL
2260 2270 2280 2290 2300
CFNGHASDVG YISSSGSIVA ASGYSSSGAN VVVWDTLAPP STSQASINCH
2310 2320 2330 2340 2350
EGGARSISVF DNDIGSGSIS PMIVTGGKNG DVGLHDFRFI ATGKMKKQRN
2360 2370 2380 2390 2400
PDGGSSTDGD QNKNGMLWYI PKAHLGSVTK IATIPRTSLF LTGSKDGEVK
2410 2420 2430 2440 2450
LWDAKAAKLI HHWPKLHERH TFLQPNSRGY GGIIRVSEPN HLKHNPFIVF
2460 2470 2480
SHSGFGFLVN QNQSNVGVCN RIWVCVTNLV
Length:2,480
Mass (Da):272,676
Last modified:May 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5360784590877CBE
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC006418 Genomic DNA Translation: AAD20167.1

Protein sequence database of the Protein Information Resource

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PIRi
D84904

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006418 Genomic DNA Translation: AAD20167.1
PIRiD84904

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

eggNOGiKOG1064 Eukaryota
ENOG410XPUM LUCA
PhylomeDBiQ9ZPY3

Gene expression databases

ExpressionAtlasiQ9ZPY3 baseline and differential

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR022033 Rav1p_C
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF12234 Rav1p_C, 1 hit
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 10 hits
SUPFAMiSSF50978 SSF50978, 3 hits
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9ZPY3_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9ZPY3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 31, 2019
This is version 118 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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