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Entry version 183 (17 Jun 2020)
Sequence version 3 (29 May 2013)
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Protein

Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial

Gene

GLU1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in glutamate biosynthesis in leaf. Required for the reassimilation of ammonium ions generated during photorespiration.4 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Protein has several cofactor binding sites:

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: L-glutamate biosynthesis via GLT pathway

This protein is involved in step 1 of the subpathway that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine (ferredoxin route).
Proteins known to be involved in this subpathway in this organism are:
  1. Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial (GLU1), Ferredoxin-dependent glutamate synthase 2, chloroplastic (GLU2)
This subpathway is part of the pathway L-glutamate biosynthesis via GLT pathway, which is itself part of Amino-acid biosynthesis.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine (ferredoxin route), the pathway L-glutamate biosynthesis via GLT pathway and in Amino-acid biosynthesis.

Pathwayi: nitrogen metabolism

This protein is involved in the pathway nitrogen metabolism, which is part of Energy metabolism.
View all proteins of this organism that are known to be involved in the pathway nitrogen metabolism and in Energy metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei106For GATase activityBy similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi1237Iron-sulfur (3Fe-4S)By similarity1
Metal bindingi1243Iron-sulfur (3Fe-4S)By similarity1
Metal bindingi1248Iron-sulfur (3Fe-4S)By similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi1184 – 1241FMNBy similarityAdd BLAST58

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionOxidoreductase
Biological processAmino-acid biosynthesis, Glutamate biosynthesis
Ligand3Fe-4S, FAD, Flavoprotein, FMN, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
ARA:AT5G04140-MONOMER

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
1.4.7.1 399

UniPathway: a resource for the exploration and annotation of metabolic pathways

More...
UniPathwayi
UPA00045
UPA00634;UER00691

Protein family/group databases

MEROPS protease database

More...
MEROPSi
C44.951

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial (EC:1.4.7.1)
Alternative name(s):
Fd-GOGAT 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:GLU1
Synonyms:GLS1
Ordered Locus Names:At5g04140
ORF Names:F21E1_60
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G04140

The Arabidopsis Information Resource

More...
TAIRi
locus:2146718 AT5G04140

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Mitochondrion, Plastid

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Displays photorespiratory chlorosis when grown at ambient CO2.1 Publication

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi1270L → F in glu1-201; Abolishes interaction with SHM1. Displays photorespiratory chlorosis when grown at ambient CO2. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 105Chloroplast and mitochondrionSequence analysisAdd BLAST105
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_0000011614106 – 1622Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrialAdd BLAST1517

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9ZNZ7

PRoteomics IDEntifications database

More...
PRIDEi
Q9ZNZ7

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
248543 [Q9ZNZ7-1]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9ZNZ7

MetOSite database of methionine sulfoxide sites

More...
MetOSitei
Q9ZNZ7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Highly expressed in leaves. High expression in the leaf mesophyll and phloem companion cell-sieve element complex.2 Publications

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Up-regulated by GATA21/GNC and GATA22/CGA1. Induced by light or sucrose.2 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9ZNZ7 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9ZNZ7 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with SHM1.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

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BioGRIDi
15572, 4 interactors

Protein interaction database and analysis system

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IntActi
Q9ZNZ7, 2 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT5G04140.2

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9ZNZ7

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini106 – 505Glutamine amidotransferase type-2PROSITE-ProRule annotationAdd BLAST400

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the glutamate synthase family.Curated

Keywords - Domaini

Glutamine amidotransferase, Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0399 Eukaryota
COG0067 LUCA
COG0069 LUCA
COG0070 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_000422_8_2_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9ZNZ7

KEGG Orthology (KO)

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KOi
K00284

Identification of Orthologs from Complete Genome Data

More...
OMAi
YKGMVRS

Database of Orthologous Groups

More...
OrthoDBi
126283at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00982 gltB_C, 1 hit
cd02808 GltS_FMN, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.160.20.60, 1 hit
3.20.20.70, 2 hits
3.60.20.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013785 Aldolase_TIM
IPR017932 GATase_2_dom
IPR002489 Glu_synth_asu_C
IPR036485 Glu_synth_asu_C_sf
IPR006982 Glu_synth_centr_N
IPR002932 Glu_synthdom
IPR029055 Ntn_hydrolases_N

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00310 GATase_2, 1 hit
PF04898 Glu_syn_central, 1 hit
PF01645 Glu_synthase, 1 hit
PF01493 GXGXG, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF56235 SSF56235, 1 hit
SSF69336 SSF69336, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51278 GATASE_TYPE_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9ZNZ7-1) [UniParc]FASTAAdd to basket
Also known as: Short

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAMQSLSPVP KLLSTTPSSV LSSDKNFFFV DFVGLYCKSK RTRRRLRGDS
60 70 80 90 100
SSSSRSSSSL SRLSSVRAVI DLERVHGVSE KDLSSPSALR PQVANLEDIL
110 120 130 140 150
SERGACGVGF IANLDNIPSH GVVKDALIAL GCMEHRGGCG ADNDSGDGSG
160 170 180 190 200
LMSSIPWDFF NVWAKEQSLA PFDKLHTGVG MIFLPQDDTF MQEAKQVIEN
210 220 230 240 250
IFEKEGLQVL GWREVPVNVP IVGKNARETM PNIQQVFVKI AKEDSTDDIE
260 270 280 290 300
RELYICRKLI ERAVATESWG TELYFCSLSN QTIVYKGMLR SEALGLFYLD
310 320 330 340 350
LQNELYESPF AIYHRRYSTN TSPRWPLAQP MRFLGHNGEI NTIQGNLNWM
360 370 380 390 400
QSREASLKAA VWNGRENEIR PFGNPRGSDS ANLDSAAEIM IRSGRTPEEA
410 420 430 440 450
LMILVPEAYK NHPTLSVKYP EVVDFYDYYK GQMEAWDGPA LLLFSDGKTV
460 470 480 490 500
GACLDRNGLR PARYWRTSDN FVYVASEVGV VPVDEAKVTM KGRLGPGMMI
510 520 530 540 550
AVDLVNGQVY ENTEVKKRIS SFNPYGKWIK ENSRFLKPVN FKSSTVMENE
560 570 580 590 600
EILRSQQAFG YSSEDVQMVI ESMASQGKEP TFCMGDDIPL AGLSQRPHML
610 620 630 640 650
YDYFKQRFAQ VTNPAIDPLR EGLVMSLEVN IGKRGNILEL GPENASQVIL
660 670 680 690 700
SNPVLNEGAL EELMKDQYLK PKVLSTYFDI RKGVEGSLQK ALYYLCEAAD
710 720 730 740 750
DAVRSGSQLL VLSDRSDRLE PTRPSIPIML AVGAVHQHLI QNGLRMSASI
760 770 780 790 800
VADTAQCFST HHFACLVGYG ASAVCPYLAL ETCRQWRLSN KTVAFMRNGK
810 820 830 840 850
IPTVTIEQAQ KNYTKAVNAG LLKILSKMGI SLLSSYCGAQ IFEIYGLGQD
860 870 880 890 900
VVDLAFTGSV SKISGLTFDE LARETLSFWV KAFSEDTTKR LENFGFIQFR
910 920 930 940 950
PGGEYHSNNP EMSKLLHKAV REKSETAYAV YQQHLSNRPV NVLRDLLEFK
960 970 980 990 1000
SDRAPIPVGK VEPAVAIVQR FCTGGMSLGA ISRETHEAIA IAMNRIGGKS
1010 1020 1030 1040 1050
NSGEGGEDPI RWKPLTDVVD GYSPTLPHLK GLQNGDIATS AIKQVASGRF
1060 1070 1080 1090 1100
GVTPTFLVNA DQLEIKVAQG AKPGEGGQLP GKKVSAYIAR LRSSKPGVPL
1110 1120 1130 1140 1150
ISPPPHHDIY SIEDLAQLIF DLHQINPNAK VSVKLVAEAG IGTVASGVAK
1160 1170 1180 1190 1200
GNADIIQISG HDGGTGASPI SSIKHAGGPW ELGLTETHQT LIANGLRERV
1210 1220 1230 1240 1250
ILRVDGGLKS GVDVLMAAAM GADEYGFGSL AMIATGCVMA RICHTNNCPV
1260 1270 1280 1290 1300
GVASQREELR ARFPGVPGDL VNYFLYVAEE VRGILAQLGY NSLDDIIGRT
1310 1320 1330 1340 1350
ELLRPRDISL VKTQHLDLSY LLSSVGTPSL SSTEIRKQEV HTNGPVLDDD
1360 1370 1380 1390 1400
ILADPLVIDA IENEKVVEKT VKICNVDRAA CGRVAGVIAK KYGDTGFAGQ
1410 1420 1430 1440 1450
VNLTFLGSAG QSFGCFLIPG MNIRLIGESN DYVGKGMAGG EIVVTPVEKI
1460 1470 1480 1490 1500
GFVPEEATIV GNTCLYGATG GQIFARGKAG ERFAVRNSLA EAVVEGTGDH
1510 1520 1530 1540 1550
CCEYMTGGCV VVLGKVGRNV AAGMTGGLAY LLDEDDTLLP KINREIVKIQ
1560 1570 1580 1590 1600
RVTAPAGELQ LKSLIEAHVE KTGSSKGATI LNEWEKYLPL FWQLVPPSEE
1610 1620
DTPEASAAYV RTSTGEVTFQ SA
Length:1,622
Mass (Da):176,752
Last modified:May 29, 2013 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFAE7D097490F8A97
GO
Isoform 2 (identifier: Q9ZNZ7-2) [UniParc]FASTAAdd to basket
Also known as: Long

The sequence of this isoform differs from the canonical sequence as follows:
     92-92: Q → QVRFFTDINFTNTQRAKFHPLWGSFKQ

Note: May be due to an intron retention.Curated
Show »
Length:1,648
Mass (Da):179,920
Checksum:i58790CE711DCBF6A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti96L → W in AAC78551 (PubMed:9596633).Curated1
Sequence conflicti211G → R in AAC78551 (PubMed:9596633).Curated1
Sequence conflicti385S → C in CAA70862 (PubMed:9057836).Curated1
Sequence conflicti621 – 624EGLV → KVWF in CAA70862 (PubMed:9057836).Curated4
Sequence conflicti734A → T in CAA70862 (PubMed:9057836).Curated1
Sequence conflicti1473 – 1474IF → DI in CAA70862 (PubMed:9057836).Curated2
Sequence conflicti1585E → K in AAC78551 (PubMed:9596633).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_04651392Q → QVRFFTDINFTNTQRAKFHP LWGSFKQ in isoform 2. 1 Publication1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
Y09667 mRNA Translation: CAA70862.1
U39287 mRNA Translation: AAC78551.1
AL391716 Genomic DNA Translation: CAC05496.1
CP002688 Genomic DNA Translation: AED90703.1
CP002688 Genomic DNA Translation: AED90704.1

NCBI Reference Sequences

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RefSeqi
NP_568134.1, NM_120496.3 [Q9ZNZ7-1]
NP_850763.1, NM_180432.2 [Q9ZNZ7-2]

Genome annotation databases

Ensembl plant genome annotation project

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EnsemblPlantsi
AT5G04140.1; AT5G04140.1; AT5G04140 [Q9ZNZ7-1]
AT5G04140.2; AT5G04140.2; AT5G04140 [Q9ZNZ7-2]

Database of genes from NCBI RefSeq genomes

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GeneIDi
830292

Gramene; a comparative resource for plants

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Gramenei
AT5G04140.1; AT5G04140.1; AT5G04140 [Q9ZNZ7-1]
AT5G04140.2; AT5G04140.2; AT5G04140 [Q9ZNZ7-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
ath:AT5G04140

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y09667 mRNA Translation: CAA70862.1
U39287 mRNA Translation: AAC78551.1
AL391716 Genomic DNA Translation: CAC05496.1
CP002688 Genomic DNA Translation: AED90703.1
CP002688 Genomic DNA Translation: AED90704.1
RefSeqiNP_568134.1, NM_120496.3 [Q9ZNZ7-1]
NP_850763.1, NM_180432.2 [Q9ZNZ7-2]

3D structure databases

SMRiQ9ZNZ7
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi15572, 4 interactors
IntActiQ9ZNZ7, 2 interactors
STRINGi3702.AT5G04140.2

Protein family/group databases

MEROPSiC44.951

PTM databases

iPTMnetiQ9ZNZ7
MetOSiteiQ9ZNZ7

Proteomic databases

PaxDbiQ9ZNZ7
PRIDEiQ9ZNZ7
ProteomicsDBi248543 [Q9ZNZ7-1]

Genome annotation databases

EnsemblPlantsiAT5G04140.1; AT5G04140.1; AT5G04140 [Q9ZNZ7-1]
AT5G04140.2; AT5G04140.2; AT5G04140 [Q9ZNZ7-2]
GeneIDi830292
GrameneiAT5G04140.1; AT5G04140.1; AT5G04140 [Q9ZNZ7-1]
AT5G04140.2; AT5G04140.2; AT5G04140 [Q9ZNZ7-2]
KEGGiath:AT5G04140

Organism-specific databases

AraportiAT5G04140
TAIRilocus:2146718 AT5G04140

Phylogenomic databases

eggNOGiKOG0399 Eukaryota
COG0067 LUCA
COG0069 LUCA
COG0070 LUCA
HOGENOMiCLU_000422_8_2_1
InParanoidiQ9ZNZ7
KOiK00284
OMAiYKGMVRS
OrthoDBi126283at2759

Enzyme and pathway databases

UniPathwayiUPA00045
UPA00634;UER00691
BioCyciARA:AT5G04140-MONOMER
BRENDAi1.4.7.1 399

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9ZNZ7

Gene expression databases

ExpressionAtlasiQ9ZNZ7 baseline and differential
GenevisibleiQ9ZNZ7 AT

Family and domain databases

CDDicd00982 gltB_C, 1 hit
cd02808 GltS_FMN, 1 hit
Gene3Di2.160.20.60, 1 hit
3.20.20.70, 2 hits
3.60.20.10, 1 hit
InterProiView protein in InterPro
IPR013785 Aldolase_TIM
IPR017932 GATase_2_dom
IPR002489 Glu_synth_asu_C
IPR036485 Glu_synth_asu_C_sf
IPR006982 Glu_synth_centr_N
IPR002932 Glu_synthdom
IPR029055 Ntn_hydrolases_N
PfamiView protein in Pfam
PF00310 GATase_2, 1 hit
PF04898 Glu_syn_central, 1 hit
PF01645 Glu_synthase, 1 hit
PF01493 GXGXG, 1 hit
SUPFAMiSSF56235 SSF56235, 1 hit
SSF69336 SSF69336, 1 hit
PROSITEiView protein in PROSITE
PS51278 GATASE_TYPE_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiGLTB1_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9ZNZ7
Secondary accession number(s): P93649
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: May 29, 2013
Last modified: June 17, 2020
This is version 183 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families
  3. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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