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Entry version 167 (17 Jun 2020)
Sequence version 1 (01 Nov 1999)
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Protein

Testis-specific chromodomain protein Y 1

Gene

CDY1

more
Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Has histone acetyltransferase activity, with a preference for histone H4.1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

  • spermatogenesis Source: ProtInc

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionAcyltransferase, Transferase

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Testis-specific chromodomain protein Y 1 (EC:2.3.1.48)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CDY1
Synonyms:CDY1A
AND
Name:CDY1B
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome Y

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
HostDB:ENSG00000172288.7
HostDB:ENSG00000172352.5

Human Gene Nomenclature Database

More...
HGNCi
HGNC:1809 CDY1
HGNC:23920 CDY1B

Online Mendelian Inheritance in Man (OMIM)

More...
MIMi
400016 gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q9Y6F8

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
9085

GeneReviews a resource of expert-authored, peer-reviewed disease descriptions.

More...
GeneReviewsi
CDY1

MalaCards human disease database

More...
MalaCardsi
CDY1

Open Targets

More...
OpenTargetsi
ENSG00000172352

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA26354

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q9Y6F8 Tbio

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...
ChEMBLi
CHEMBL3879864

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
CDY1

Domain mapping of disease mutations (DMDM)

More...
DMDMi
20138089

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000802191 – 540Testis-specific chromodomain protein Y 1Add BLAST540

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q9Y6F8

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q9Y6F8

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9Y6F8

PRoteomics IDEntifications database

More...
PRIDEi
Q9Y6F8

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
86670 [Q9Y6F8-1]
86671 [Q9Y6F8-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9Y6F8

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9Y6F8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Testis-specific. Detected in spermatids (at protein level).1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000172288 Expressed in testis and 2 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9Y6F8 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
ENSG00000172288 Tissue enriched (testis)
ENSG00000172352 Tissue enriched (testis)

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts (via chromo domain) with histone H3K9me3.

1 Publication

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
114541, 1 interactor
128959, 1 interactor

Chemistry databases

BindingDB database of measured binding affinities

More...
BindingDBi
Q9Y6F8

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q9Y6F8 protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1540
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9Y6F8

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q9Y6F8

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini6 – 66ChromoPROSITE-ProRule annotationAdd BLAST61

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0016 Eukaryota
KOG1911 Eukaryota
COG1024 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155106

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_009834_24_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9Y6F8

KEGG Orthology (KO)

More...
KOi
K00653

Identification of Orthologs from Complete Genome Data

More...
OMAi
CKALVCC

Database of Orthologous Groups

More...
OrthoDBi
1471901at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9Y6F8

TreeFam database of animal gene trees

More...
TreeFami
TF313375

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.12.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR017984 Chromo_dom_subgr
IPR023780 Chromo_domain
IPR023779 Chromodomain_CS
IPR029045 ClpP/crotonase-like_dom_sf
IPR001753 Enoyl-CoA_hydra/iso
IPR014748 Enoyl-CoA_hydra_C

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00385 Chromo, 1 hit
PF00378 ECH_1, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00504 CHROMODOMAIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00298 CHROMO, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52096 SSF52096, 1 hit
SSF54160 SSF54160, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00598 CHROMO_1, 1 hit
PS50013 CHROMO_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9Y6F8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MASQEFEVEA IVDKRQDKNG NTQYLVRWKG YDKQDDTWEP EQHLMNCEKC
60 70 80 90 100
VHDFNRRQTE KQKKLTWTTT SRIFSNNARR RTSRSTKANY SKNSPKTPVT
110 120 130 140 150
DKHHRSKNRK LFAASKNVRR KAASILSDTK NMEIINSTIE TLAPDSPFDH
160 170 180 190 200
KTVSGFQKLE KLDPIAADQQ DTVVFKVTEG KLLRDPLSRP GAEQTGIQNK
210 220 230 240 250
TQIHPLMSQM SGSVTASMAT GSATRKGIVV LIDPLAANGT TDMHTSVPRV
260 270 280 290 300
KGGQRNITDD SRDQPFIKKM HFTIRLTESA STYRDIVVKK EDGFTQIVLS
310 320 330 340 350
TRSTEKNALN TEVIKEIVNA LNSAAADDSK LVLFSAAGSV FCCGLDFGYF
360 370 380 390 400
VKHLRNNRNT ASLEMVDTIK NFVNTFIQFK KPIVVSVNGP AIGLGASILP
410 420 430 440 450
LCDLVWANEK AWFQTPYTTF GQSPDGCSSI TFPKMMGKAS ANEMLIAGRK
460 470 480 490 500
LTAREACAKG LVSQVFLTGT FTQEVMIQIK ELASYNPIVL EECKALVRCN
510 520 530 540
IKLELEQANE RECEVLRKIW SSAQGIESML KYVENKIDEF
Length:540
Mass (Da):60,473
Last modified:November 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5B7AEB789092A265
GO
Isoform 2 (identifier: Q9Y6F8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     532-540: YVENKIDEF → IPLLGYKAAFPPRKTQNDQRWCP

Show »
Length:554
Mass (Da):62,017
Checksum:i84D4036A68AF8300
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_001079532 – 540YVENKIDEF → IPLLGYKAAFPPRKTQNDQR WCP in isoform 2. 2 Publications9

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF000981 mRNA Translation: AAC52116.1
AF080597 mRNA Translation: AAD22732.1
BC132929 mRNA Translation: AAI32930.1
BC132955 mRNA Translation: AAI32956.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS14801.1 [Q9Y6F8-2]
CCDS14802.1 [Q9Y6F8-1]
CCDS35486.1 [Q9Y6F8-2]
CCDS35487.1 [Q9Y6F8-1]

NCBI Reference Sequences

More...
RefSeqi
NP_001003894.1, NM_001003894.1 [Q9Y6F8-1]
NP_001003895.1, NM_001003895.1 [Q9Y6F8-2]
NP_004671.1, NM_004680.2 [Q9Y6F8-2]
NP_733841.1, NM_170723.1 [Q9Y6F8-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000306609; ENSP00000302968; ENSG00000172288 [Q9Y6F8-2]
ENST00000306882; ENSP00000303178; ENSG00000172352 [Q9Y6F8-2]
ENST00000361963; ENSP00000354799; ENSG00000172288 [Q9Y6F8-1]
ENST00000382407; ENSP00000371844; ENSG00000172352 [Q9Y6F8-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
253175
9085

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:253175
hsa:9085

UCSC genome browser

More...
UCSCi
uc004fvz.4 human [Q9Y6F8-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF000981 mRNA Translation: AAC52116.1
AF080597 mRNA Translation: AAD22732.1
BC132929 mRNA Translation: AAI32930.1
BC132955 mRNA Translation: AAI32956.1
CCDSiCCDS14801.1 [Q9Y6F8-2]
CCDS14802.1 [Q9Y6F8-1]
CCDS35486.1 [Q9Y6F8-2]
CCDS35487.1 [Q9Y6F8-1]
RefSeqiNP_001003894.1, NM_001003894.1 [Q9Y6F8-1]
NP_001003895.1, NM_001003895.1 [Q9Y6F8-2]
NP_004671.1, NM_004680.2 [Q9Y6F8-2]
NP_733841.1, NM_170723.1 [Q9Y6F8-1]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FBMX-ray2.28A/B/C281-531[»]
6V41X-ray1.60AAA2-63[»]
SMRiQ9Y6F8
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi114541, 1 interactor
128959, 1 interactor

Chemistry databases

BindingDBiQ9Y6F8
ChEMBLiCHEMBL3879864

PTM databases

iPTMnetiQ9Y6F8
PhosphoSitePlusiQ9Y6F8

Polymorphism and mutation databases

BioMutaiCDY1
DMDMi20138089

Proteomic databases

jPOSTiQ9Y6F8
MassIVEiQ9Y6F8
PaxDbiQ9Y6F8
PRIDEiQ9Y6F8
ProteomicsDBi86670 [Q9Y6F8-1]
86671 [Q9Y6F8-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
21896 56 antibodies
73015 45 antibodies

Genome annotation databases

EnsembliENST00000306609; ENSP00000302968; ENSG00000172288 [Q9Y6F8-2]
ENST00000306882; ENSP00000303178; ENSG00000172352 [Q9Y6F8-2]
ENST00000361963; ENSP00000354799; ENSG00000172288 [Q9Y6F8-1]
ENST00000382407; ENSP00000371844; ENSG00000172352 [Q9Y6F8-1]
GeneIDi253175
9085
KEGGihsa:253175
hsa:9085
UCSCiuc004fvz.4 human [Q9Y6F8-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
253175
9085
DisGeNETi9085
EuPathDBiHostDB:ENSG00000172288.7
HostDB:ENSG00000172352.5

GeneCards: human genes, protein and diseases

More...
GeneCardsi
CDY1
CDY1B
GeneReviewsiCDY1
HGNCiHGNC:1809 CDY1
HGNC:23920 CDY1B
HPAiENSG00000172288 Tissue enriched (testis)
ENSG00000172352 Tissue enriched (testis)
MalaCardsiCDY1
MIMi400016 gene
neXtProtiNX_Q9Y6F8
OpenTargetsiENSG00000172352
PharmGKBiPA26354

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG0016 Eukaryota
KOG1911 Eukaryota
COG1024 LUCA
GeneTreeiENSGT00940000155106
HOGENOMiCLU_009834_24_0_1
InParanoidiQ9Y6F8
KOiK00653
OMAiCKALVCC
OrthoDBi1471901at2759
PhylomeDBiQ9Y6F8
TreeFamiTF313375

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
253175 1 hit in 400 CRISPR screens
9085 2 hits in 68 CRISPR screens
EvolutionaryTraceiQ9Y6F8

The Gene Wiki collection of pages on human genes and proteins

More...
GeneWikii
CDY1
PharosiQ9Y6F8 Tbio

Protein Ontology

More...
PROi
PR:Q9Y6F8
RNActiQ9Y6F8 protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSG00000172288 Expressed in testis and 2 other tissues
GenevisibleiQ9Y6F8 HS

Family and domain databases

Gene3Di1.10.12.10, 1 hit
InterProiView protein in InterPro
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR017984 Chromo_dom_subgr
IPR023780 Chromo_domain
IPR023779 Chromodomain_CS
IPR029045 ClpP/crotonase-like_dom_sf
IPR001753 Enoyl-CoA_hydra/iso
IPR014748 Enoyl-CoA_hydra_C
PfamiView protein in Pfam
PF00385 Chromo, 1 hit
PF00378 ECH_1, 1 hit
PRINTSiPR00504 CHROMODOMAIN
SMARTiView protein in SMART
SM00298 CHROMO, 1 hit
SUPFAMiSSF52096 SSF52096, 1 hit
SSF54160 SSF54160, 1 hit
PROSITEiView protein in PROSITE
PS00598 CHROMO_1, 1 hit
PS50013 CHROMO_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCDY1_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9Y6F8
Secondary accession number(s): A2RUK1, O14600
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: November 1, 1999
Last modified: June 17, 2020
This is version 167 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. Human chromosome Y
    Human chromosome Y: entries, gene names and cross-references to MIM
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