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UniProtKB - Q9Y3D3 (RT16_HUMAN)

Entry version 180 (07 Apr 2021)
Sequence version 1 (01 Nov 1999)
Previous versions | rss
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Protein

28S ribosomal protein S16, mitochondrial

Gene

MRPS16

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...PathwayCommonsi		Q9Y3D3

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-5368286, Mitochondrial translation initiation
R-HSA-5389840, Mitochondrial translation elongation
R-HSA-5419276, Mitochondrial translation termination

SIGNOR Signaling Network Open Resource

More...SIGNORi		Q9Y3D3

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
28S ribosomal protein S16, mitochondrial
Short name:
MRP-S16
Short name:
S16mt
Alternative name(s):
Mitochondrial small ribosomal subunit protein bS16m1 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:MRPS16
Synonyms:RPMS16
ORF Names:CGI-132
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

Organism-specific databases

Human Gene Nomenclature Database

More...HGNCi		HGNC:14048, MRPS16

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		609204, gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q9Y3D3

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSG00000182180.13

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Mitochondrion

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section provides information on the disease(s) associated with genetic variations in a given protein. The information is extracted from the scientific literature and diseases that are also described in the <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim">OMIM</a> database are represented with a <a href="http://www.uniprot.org/diseases">controlled vocabulary</a> in the following way:<p><a href='/help/involvement_in_disease' target='_top'>More...</a></p>Involvement in diseasei

Combined oxidative phosphorylation deficiency 2 (COXPD2)1 Publication
The disease is caused by variants affecting the gene represented in this entry.
Disease descriptionA mitochondrial disease resulting in fatal neonatal metabolic acidosis with agenesis of the corpus callosum.
Related information in OMIM

Keywords - Diseasei

Primary mitochondrial disease

Organism-specific databases

DisGeNET

More...DisGeNETi		51021

MalaCards human disease database

More...MalaCardsi		MRPS16
MIMi610498, phenotype

Open Targets

More...OpenTargetsi		ENSG00000182180

Orphanet; a database dedicated to information on rare diseases and orphan drugs

More...Orphaneti		254920, Combined oxidative phosphorylation defect type 2

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA31000

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q9Y3D3, Tbio

Genetic variation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		MRPS16

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 34MitochondrionSequence analysisAdd BLAST34
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000003061835 – 13728S ribosomal protein S16, mitochondrialAdd BLAST103

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei130PhosphothreonineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q9Y3D3

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q9Y3D3

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q9Y3D3

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q9Y3D3

PeptideAtlas

More...PeptideAtlasi		Q9Y3D3

PRoteomics IDEntifications database

More...PRIDEi		Q9Y3D3

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		5646
86020 [Q9Y3D3-1]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q9Y3D3

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q9Y3D3

SwissPalm database of S-palmitoylation events

More...SwissPalmi		Q9Y3D3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000182180, Expressed in left adrenal gland and 216 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q9Y3D3, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q9Y3D3, HS

Organism-specific databases

Human Protein Atlas

More...HPAi		ENSG00000182180, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the mitochondrial small ribosomal subunit (mt-SSU). Mature mammalian 55S mitochondrial ribosomes consist of a small (28S) and a large (39S) subunit. The 28S small subunit contains a 12S ribosomal RNA (12S mt-rRNA) and 30 different proteins. The 39S large subunit contains a 16S rRNA (16S mt-rRNA), a copy of mitochondrial valine transfer RNA (mt-tRNA(Val)), which plays an integral structural role, and 52 different proteins. bS16m has a zinc binding site.

1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		119227, 129 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-5225, 28S mitochondrial small ribosomal subunit

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		Q9Y3D3

Protein interaction database and analysis system

More...IntActi		Q9Y3D3, 31 interactors

Molecular INTeraction database

More...MINTi		Q9Y3D3

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000362036

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q9Y3D3, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q9Y3D3

Database of comparative protein structure models

More...ModBasei		Search...

Protein Data Bank in Europe - Knowledge Base

More...PDBe-KBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS16 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG3419, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00390000014309

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_100590_4_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q9Y3D3

Identification of Orthologs from Complete Genome Data

More...OMAi		YHGGHVV

Database of Orthologous Groups

More...OrthoDBi		1630052at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q9Y3D3

TreeFam database of animal gene trees

More...TreeFami		TF105637

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.30.1320.10, 1 hit

HAMAP database of protein families

More...HAMAPi		MF_00385, Ribosomal_S16, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR000307, Ribosomal_S16
IPR023803, Ribosomal_S16_dom_sf

The PANTHER Classification System

More...PANTHERi		PTHR12919, PTHR12919, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00886, Ribosomal_S16, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF54565, SSF54565, 1 hit

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR00002, S16, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9Y3D3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MVHLTTLLCK AYRGGHLTIR LALGGCTNRP FYRIVAAHNK CPRDGRFVEQ 
        60         70         80         90        100
LGSYDPLPNS HGEKLVALNL DRIRHWIGCG AHLSKPMEKL LGLAGFFPLH 
       110        120        130 
PMMITNAERL RRKRAREVLL ASQKTDAEAT DTEATET
Length:137
Mass (Da):15,345
Last modified:November 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC12B14B1B357F8D6
GO
Isoform 2 (identifier: Q9Y3D3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     93-137: LAGFFPLHPM...EATDTEATET → KTDARFPEQGEERPEQHHFPEDLAPARGRGL

Show »
Length:123
Mass (Da):13,829
Checksum:i7F07429818B68914
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A6ND22A6ND22_HUMAN
28S ribosomal protein S16, mitochon...
MRPS16
99Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_03152512Y → H. Corresponds to variant dbSNP:rs7905009EnsemblClinVar.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_05649893 – 137LAGFF…EATET → KTDARFPEQGEERPEQHHFP EDLAPARGRGL in isoform 2. 1 PublicationAdd BLAST45

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AF151890 mRNA Translation: AAD34127.1
AB049948 mRNA Translation: BAB41001.1
AK303204 mRNA Translation: BAG64294.1
AC016394 Genomic DNA No translation available.
BC021106 mRNA Translation: AAH21106.1
AB051351 Genomic DNA Translation: BAB54941.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS7323.1 [Q9Y3D3-1]

NCBI Reference Sequences

More...RefSeqi		NP_057149.1, NM_016065.3 [Q9Y3D3-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000372945; ENSP00000362036; ENSG00000182180 [Q9Y3D3-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		51021

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:51021

UCSC genome browser

More...UCSCi		uc001jts.1, human [Q9Y3D3-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF151890 mRNA Translation: AAD34127.1
AB049948 mRNA Translation: BAB41001.1
AK303204 mRNA Translation: BAG64294.1
AC016394 Genomic DNA No translation available.
BC021106 mRNA Translation: AAH21106.1
AB051351 Genomic DNA Translation: BAB54941.1
CCDSiCCDS7323.1 [Q9Y3D3-1]
RefSeqiNP_057149.1, NM_016065.3 [Q9Y3D3-1]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J9Melectron microscopy3.50AM1-137[»]
6NU2electron microscopy3.90AM10-125[»]
6NU3electron microscopy4.40AM1-137[»]
6RW4electron microscopy2.97M1-137[»]
6RW5electron microscopy3.14M1-137[»]
6VLZelectron microscopy2.97AM1-137[»]
6VMIelectron microscopy2.96AM1-137[»]
6ZM5electron microscopy2.89AM1-137[»]
6ZM6electron microscopy2.59AM1-137[»]
6ZS9electron microscopy4.00AM1-137[»]
6ZSAelectron microscopy4.00AM1-136[»]
6ZSBelectron microscopy4.50AM1-137[»]
6ZSCelectron microscopy3.50AM1-137[»]
6ZSDelectron microscopy3.70AM1-137[»]
6ZSEelectron microscopy5.00AM1-137[»]
6ZSGelectron microscopy4.00AM1-137[»]
7A5Felectron microscopy4.40M61-137[»]
7A5Gelectron microscopy4.33M61-137[»]
7A5Ielectron microscopy3.70M61-137[»]
7A5Kelectron microscopy3.70M61-137[»]
SMRiQ9Y3D3
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi119227, 129 interactors
ComplexPortaliCPX-5225, 28S mitochondrial small ribosomal subunit
CORUMiQ9Y3D3
IntActiQ9Y3D3, 31 interactors
MINTiQ9Y3D3
STRINGi9606.ENSP00000362036

PTM databases

iPTMnetiQ9Y3D3
PhosphoSitePlusiQ9Y3D3
SwissPalmiQ9Y3D3

Genetic variation databases

BioMutaiMRPS16

Proteomic databases

EPDiQ9Y3D3
jPOSTiQ9Y3D3
MassIVEiQ9Y3D3
PaxDbiQ9Y3D3
PeptideAtlasiQ9Y3D3
PRIDEiQ9Y3D3
ProteomicsDBi5646
86020 [Q9Y3D3-1]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		45368, 116 antibodies

The DNASU plasmid repository

More...DNASUi		51021

Genome annotation databases

EnsembliENST00000372945; ENSP00000362036; ENSG00000182180 [Q9Y3D3-1]
GeneIDi51021
KEGGihsa:51021
UCSCiuc001jts.1, human [Q9Y3D3-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		51021
DisGeNETi51021

GeneCards: human genes, protein and diseases

More...GeneCardsi		MRPS16
HGNCiHGNC:14048, MRPS16
HPAiENSG00000182180, Low tissue specificity
MalaCardsiMRPS16
MIMi609204, gene
610498, phenotype
neXtProtiNX_Q9Y3D3
OpenTargetsiENSG00000182180
Orphaneti254920, Combined oxidative phosphorylation defect type 2
PharmGKBiPA31000
VEuPathDBiHostDB:ENSG00000182180.13

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiKOG3419, Eukaryota
GeneTreeiENSGT00390000014309
HOGENOMiCLU_100590_4_0_1
InParanoidiQ9Y3D3
OMAiYHGGHVV
OrthoDBi1630052at2759
PhylomeDBiQ9Y3D3
TreeFamiTF105637

Enzyme and pathway databases

PathwayCommonsiQ9Y3D3
ReactomeiR-HSA-5368286, Mitochondrial translation initiation
R-HSA-5389840, Mitochondrial translation elongation
R-HSA-5419276, Mitochondrial translation termination
SIGNORiQ9Y3D3

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		51021, 425 hits in 1009 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		MRPS16, human

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		MRPS16

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		51021
PharosiQ9Y3D3, Tbio

Protein Ontology

More...PROi		PR:Q9Y3D3
RNActiQ9Y3D3, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000182180, Expressed in left adrenal gland and 216 other tissues
ExpressionAtlasiQ9Y3D3, baseline and differential
GenevisibleiQ9Y3D3, HS

Family and domain databases

Gene3Di3.30.1320.10, 1 hit
HAMAPiMF_00385, Ribosomal_S16, 1 hit
InterProiView protein in InterPro
IPR000307, Ribosomal_S16
IPR023803, Ribosomal_S16_dom_sf
PANTHERiPTHR12919, PTHR12919, 1 hit
PfamiView protein in Pfam
PF00886, Ribosomal_S16, 1 hit
SUPFAMiSSF54565, SSF54565, 1 hit
TIGRFAMsiTIGR00002, S16, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRT16_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9Y3D3
Secondary accession number(s): B4E032, Q96Q60
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: November 1, 1999
Last modified: April 7, 2021
This is version 180 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Human chromosome 10
    Human chromosome 10: entries, gene names and cross-references to MIM
  3. Human entries with genetic variants
    List of human entries with genetic variants
  4. Human variants curated from literature reports
    Index of human variants curated from literature reports
  5. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  6. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  7. SIMILARITY comments
    Index of protein domains and families
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