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Entry version 178 (18 Sep 2019)
Sequence version 1 (01 Nov 1999)
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Protein

39S ribosomal protein L11, mitochondrial

Gene

MRPL11

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-5368286 Mitochondrial translation initiation
R-HSA-5389840 Mitochondrial translation elongation
R-HSA-5419276 Mitochondrial translation termination

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
39S ribosomal protein L11, mitochondrial
Short name:
L11mt
Short name:
MRP-L11
Alternative name(s):
Mitochondrial large ribosomal subunit protein uL11m1 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:MRPL11
ORF Names:CGI-113
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Human Gene Nomenclature Database

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HGNCi
HGNC:14042 MRPL11

Online Mendelian Inheritance in Man (OMIM)

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MIMi
611826 gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q9Y3B7

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
65003

Open Targets

More...
OpenTargetsi
ENSG00000174547

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA30940

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
MRPL11

Domain mapping of disease mutations (DMDM)

More...
DMDMi
22001931

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – ?MitochondrionSequence analysis
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_0000030443? – 19239S ribosomal protein L11, mitochondrial

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q9Y3B7

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q9Y3B7

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q9Y3B7

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9Y3B7

PeptideAtlas

More...
PeptideAtlasi
Q9Y3B7

PRoteomics IDEntifications database

More...
PRIDEi
Q9Y3B7

ProteomicsDB human proteome resource

More...
ProteomicsDBi
1491
86004 [Q9Y3B7-1]
86005 [Q9Y3B7-2]

Consortium for Top Down Proteomics

More...
TopDownProteomicsi
Q9Y3B7-1 [Q9Y3B7-1]
Q9Y3B7-2 [Q9Y3B7-2]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9Y3B7

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9Y3B7

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q9Y3B7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000174547 Expressed in 191 organ(s), highest expression level in mucosa of transverse colon

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9Y3B7 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9Y3B7 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA057685

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the mitochondrial large ribosomal subunit (mt-LSU) (PubMed:28892042, PubMed:25838379, PubMed:25278503). Mature mammalian 55S mitochondrial ribosomes consist of a small (28S) and a large (39S) subunit. The 28S small subunit contains a 12S ribosomal RNA (12S mt-rRNA) and 30 different proteins. The 39S large subunit contains a 16S rRNA (16S mt-rRNA), a copy of mitochondrial valine transfer RNA (mt-tRNA(Val)), which plays an integral structural role, and 52 different proteins.

3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
122369, 102 interactors

CORUM comprehensive resource of mammalian protein complexes

More...
CORUMi
Q9Y3B7

Protein interaction database and analysis system

More...
IntActi
Q9Y3B7, 63 interactors

Molecular INTeraction database

More...
MINTi
Q9Y3B7

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000308897

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9Y3B7

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3257 Eukaryota
COG0080 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00390000003153

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000082123

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9Y3B7

KEGG Orthology (KO)

More...
KOi
K02867

Identification of Orthologs from Complete Genome Data

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OMAi
CKQFNAK

Database of Orthologous Groups

More...
OrthoDBi
1346532at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9Y3B7

TreeFam database of animal gene trees

More...
TreeFami
TF313471

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00349 Ribosomal_L11, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
1.10.10.250, 1 hit
3.30.1550.10, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_00736 Ribosomal_L11, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000911 Ribosomal_L11/L12
IPR036796 Ribosomal_L11/L12_N_sf
IPR006519 Ribosomal_L11_bac-typ
IPR020783 Ribosomal_L11_C
IPR036769 Ribosomal_L11_C_sf
IPR020784 Ribosomal_L11_N

The PANTHER Classification System

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PANTHERi
PTHR11661 PTHR11661, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00298 Ribosomal_L11, 1 hit
PF03946 Ribosomal_L11_N, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00649 RL11, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46906 SSF46906, 1 hit
SSF54747 SSF54747, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01632 L11_bact, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9Y3B7-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSKLGRAARG LRKPEVGGVI RAIVRAGLAM PGPPLGPVLG QRGVSINQFC
60 70 80 90 100
KEFNERTKDI KEGIPLPTKI LVKPDRTFEI KIGQPTVSYF LKAAAGIEKG
110 120 130 140 150
ARQTGKEVAG LVTLKHVYEI ARIKAQDEAF ALQDVPLSSV VRSIIGSARS
160 170 180 190
LGIRVVKDLS SEELAAFQKE RAIFLAAQKE ADLAAQEEAA KK
Length:192
Mass (Da):20,683
Last modified:November 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i92506A20044BF278
GO
Isoform 2 (identifier: Q9Y3B7-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     16-41: Missing.

Show »
Length:166
Mass (Da):18,205
Checksum:iA78DA10D323B1D24
GO
Isoform 3 (identifier: Q9Y3B7-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     158-192: DLSSEELAAFQKERAIFLAAQKEADLAAQEEAAKK → ERCSANVLRNGKISMKDPSGRSSV

Note: No experimental confirmation available.Curated
Show »
Length:181
Mass (Da):19,454
Checksum:i578392577167303F
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
E9PQB6E9PQB6_HUMAN
39S ribosomal protein L11, mitochon...
MRPL11
75Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H0YCD5H0YCD5_HUMAN
39S ribosomal protein L11, mitochon...
MRPL11
63Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti68T → I in BM554886 (PubMed:15489334).Curated1
Isoform 3 (identifier: Q9Y3B7-3)
Sequence conflicti181V → L in BM554886 (PubMed:15489334).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_04107716 – 41Missing in isoform 2. 1 PublicationAdd BLAST26
Alternative sequenceiVSP_045237158 – 192DLSSE…EAAKK → ERCSANVLRNGKISMKDPSG RSSV in isoform 3. 1 PublicationAdd BLAST35

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB049638 mRNA Translation: BAB40843.1
AF151871 mRNA Translation: AAD34108.1
AK290084 mRNA Translation: BAF82773.1
AP002748 Genomic DNA No translation available.
CH471076 Genomic DNA Translation: EAW74528.1
CH471076 Genomic DNA Translation: EAW74529.1
CH471076 Genomic DNA Translation: EAW74531.1
BC005002 mRNA Translation: AAH05002.1
BC108277 mRNA Translation: AAI08278.1
BM554886 mRNA No translation available.
AB051338 Genomic DNA Translation: BAB54928.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS44655.1 [Q9Y3B7-2]
CCDS8139.1 [Q9Y3B7-1]
CCDS8140.1 [Q9Y3B7-3]

NCBI Reference Sequences

More...
RefSeqi
NP_057134.1, NM_016050.4 [Q9Y3B7-1]
NP_733934.1, NM_170738.3 [Q9Y3B7-2]
NP_733935.1, NM_170739.3 [Q9Y3B7-3]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000310999; ENSP00000308897; ENSG00000174547 [Q9Y3B7-1]
ENST00000329819; ENSP00000329630; ENSG00000174547 [Q9Y3B7-3]
ENST00000430466; ENSP00000415356; ENSG00000174547 [Q9Y3B7-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
65003

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:65003

UCSC genome browser

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UCSCi
uc001ohy.5 human [Q9Y3B7-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB049638 mRNA Translation: BAB40843.1
AF151871 mRNA Translation: AAD34108.1
AK290084 mRNA Translation: BAF82773.1
AP002748 Genomic DNA No translation available.
CH471076 Genomic DNA Translation: EAW74528.1
CH471076 Genomic DNA Translation: EAW74529.1
CH471076 Genomic DNA Translation: EAW74531.1
BC005002 mRNA Translation: AAH05002.1
BC108277 mRNA Translation: AAI08278.1
BM554886 mRNA No translation available.
AB051338 Genomic DNA Translation: BAB54928.1
CCDSiCCDS44655.1 [Q9Y3B7-2]
CCDS8139.1 [Q9Y3B7-1]
CCDS8140.1 [Q9Y3B7-3]
RefSeqiNP_057134.1, NM_016050.4 [Q9Y3B7-1]
NP_733934.1, NM_170738.3 [Q9Y3B7-2]
NP_733935.1, NM_170739.3 [Q9Y3B7-3]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Yelectron microscopy3.40J1-192[»]
3J9Melectron microscopy3.50J1-192[»]
5OOLelectron microscopy3.06J1-192[»]
5OOMelectron microscopy3.03J1-192[»]
6NU2electron microscopy3.90J18-157[»]
6NU3electron microscopy4.40J1-192[»]
SMRiQ9Y3B7
ModBaseiSearch...

Protein-protein interaction databases

BioGridi122369, 102 interactors
CORUMiQ9Y3B7
IntActiQ9Y3B7, 63 interactors
MINTiQ9Y3B7
STRINGi9606.ENSP00000308897

PTM databases

iPTMnetiQ9Y3B7
PhosphoSitePlusiQ9Y3B7
SwissPalmiQ9Y3B7

Polymorphism and mutation databases

BioMutaiMRPL11
DMDMi22001931

Proteomic databases

EPDiQ9Y3B7
jPOSTiQ9Y3B7
MassIVEiQ9Y3B7
PaxDbiQ9Y3B7
PeptideAtlasiQ9Y3B7
PRIDEiQ9Y3B7
ProteomicsDBi1491
86004 [Q9Y3B7-1]
86005 [Q9Y3B7-2]
TopDownProteomicsiQ9Y3B7-1 [Q9Y3B7-1]
Q9Y3B7-2 [Q9Y3B7-2]

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
65003
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000310999; ENSP00000308897; ENSG00000174547 [Q9Y3B7-1]
ENST00000329819; ENSP00000329630; ENSG00000174547 [Q9Y3B7-3]
ENST00000430466; ENSP00000415356; ENSG00000174547 [Q9Y3B7-2]
GeneIDi65003
KEGGihsa:65003
UCSCiuc001ohy.5 human [Q9Y3B7-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
65003
DisGeNETi65003

GeneCards: human genes, protein and diseases

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GeneCardsi
MRPL11
HGNCiHGNC:14042 MRPL11
HPAiHPA057685
MIMi611826 gene
neXtProtiNX_Q9Y3B7
OpenTargetsiENSG00000174547
PharmGKBiPA30940

GenAtlas: human gene database

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GenAtlasi
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Phylogenomic databases

eggNOGiKOG3257 Eukaryota
COG0080 LUCA
GeneTreeiENSGT00390000003153
HOGENOMiHOG000082123
InParanoidiQ9Y3B7
KOiK02867
OMAiCKQFNAK
OrthoDBi1346532at2759
PhylomeDBiQ9Y3B7
TreeFamiTF313471

Enzyme and pathway databases

ReactomeiR-HSA-5368286 Mitochondrial translation initiation
R-HSA-5389840 Mitochondrial translation elongation
R-HSA-5419276 Mitochondrial translation termination

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
MRPL11 human

The Gene Wiki collection of pages on human genes and proteins

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GeneWikii
MRPL11

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
65003

Pharos

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Pharosi
Q9Y3B7

Protein Ontology

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PROi
PR:Q9Y3B7

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSG00000174547 Expressed in 191 organ(s), highest expression level in mucosa of transverse colon
ExpressionAtlasiQ9Y3B7 baseline and differential
GenevisibleiQ9Y3B7 HS

Family and domain databases

CDDicd00349 Ribosomal_L11, 1 hit
Gene3Di1.10.10.250, 1 hit
3.30.1550.10, 1 hit
HAMAPiMF_00736 Ribosomal_L11, 1 hit
InterProiView protein in InterPro
IPR000911 Ribosomal_L11/L12
IPR036796 Ribosomal_L11/L12_N_sf
IPR006519 Ribosomal_L11_bac-typ
IPR020783 Ribosomal_L11_C
IPR036769 Ribosomal_L11_C_sf
IPR020784 Ribosomal_L11_N
PANTHERiPTHR11661 PTHR11661, 1 hit
PfamiView protein in Pfam
PF00298 Ribosomal_L11, 1 hit
PF03946 Ribosomal_L11_N, 1 hit
SMARTiView protein in SMART
SM00649 RL11, 1 hit
SUPFAMiSSF46906 SSF46906, 1 hit
SSF54747 SSF54747, 1 hit
TIGRFAMsiTIGR01632 L11_bact, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRM11_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9Y3B7
Secondary accession number(s): A6NLT0
, A8K219, Q32P46, Q96Q73
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 26, 2002
Last sequence update: November 1, 1999
Last modified: September 18, 2019
This is version 178 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. Ribosomal proteins
    Ribosomal proteins families and list of entries
UniProt is an ELIXIR core data resource
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