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Protein

Protein Asterix

Gene

WDR83OS

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein Asterix
Alternative name(s):
WD repeat domain 83 opposite strand
WDR83 opposite strand
Gene namesi
Name:WDR83OS
Synonyms:C19orf56
ORF Names:CGI-140, My006, PTD008
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000105583.9
HGNCiHGNC:30203 WDR83OS
neXtProtiNX_Q9Y284

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei40 – 62HelicalSequence analysisAdd BLAST23
Transmembranei80 – 96HelicalSequence analysisAdd BLAST17

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162378666

Polymorphism and mutation databases

BioMutaiWDR83OS
DMDMi12585211

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00000716052 – 106Protein AsterixAdd BLAST105

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ9Y284
MaxQBiQ9Y284
PaxDbiQ9Y284
PeptideAtlasiQ9Y284
PRIDEiQ9Y284
ProteomicsDBi85693
TopDownProteomicsiQ9Y284

PTM databases

iPTMnetiQ9Y284
PhosphoSitePlusiQ9Y284

Expressioni

Gene expression databases

BgeeiENSG00000105583
CleanExiHS_C19orf56
ExpressionAtlasiQ9Y284 baseline and differential
GenevisibleiQ9Y284 HS

Organism-specific databases

HPAiHPA065685

Interactioni

Protein-protein interaction databases

BioGridi119522, 2 interactors
IntActiQ9Y284, 3 interactors
STRINGi9606.ENSP00000468969

Structurei

3D structure databases

ProteinModelPortaliQ9Y284
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Asterix family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3462 Eukaryota
ENOG4111WDX LUCA
GeneTreeiENSGT00390000002121
HOGENOMiHOG000007025
HOVERGENiHBG000507
InParanoidiQ9Y284
OMAiNVLGMIF
OrthoDBiEOG091G0W96
PhylomeDBiQ9Y284
TreeFamiTF315003

Family and domain databases

InterProiView protein in InterPro
IPR005351 UPF0139
PANTHERiPTHR13193 PTHR13193, 1 hit
PfamiView protein in Pfam
PF03669 UPF0139, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD073147 UPF0139, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9Y284-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTNNMSDPR RPNKVLRYKP PPSECNPALD DPTPDYMNLL GMIFSMCGLM
60 70 80 90 100
LKLKWCAWVA VYCSFISFAN SRSSEDTKQM MSSFMLSISA VVMSYLQNPQ

PMTPPW
Length:106
Mass (Da):12,068
Last modified:November 1, 1999 - v1
Checksum:i7D2BDDAF9279071B
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_052498104P → A. Corresponds to variant dbSNP:rs3209404Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF059620 mRNA Translation: AAG43119.1
AF078861 mRNA Translation: AAD44493.1
AF151898 mRNA Translation: AAD34135.1
AK311944 mRNA Translation: BAG34885.1
CH471106 Genomic DNA Translation: EAW84285.1
BC001192 mRNA Translation: AAH01192.1
BC042919 mRNA Translation: AAH42919.1
BC061912 mRNA Translation: AAH61912.1
CCDSiCCDS12274.1
RefSeqiNP_057229.1, NM_016145.3
XP_016882353.1, XM_017026864.1
UniGeneiHs.108969
Hs.657204

Genome annotation databases

EnsembliENST00000596731; ENSP00000468969; ENSG00000105583
GeneIDi51398
KEGGihsa:51398
UCSCiuc002mud.3 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiASTER_HUMAN
AccessioniPrimary (citable) accession number: Q9Y284
Secondary accession number(s): B2R4T8, Q9BVI3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 24, 2001
Last sequence update: November 1, 1999
Last modified: July 18, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

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