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Protein
Submitted name:

COLlagen

Gene

col-65

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
COLlagenImported
Gene namesi
Name:col-65Imported
ORF Names:CELE_K08C9.4Imported, K08C9.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiK08C9.4 ; CE18860 ; WBGene00000641 ; col-65

Subcellular locationi

PTM / Processingi

Proteomic databases

EPDiQ9XUT4
PaxDbiQ9XUT4
PeptideAtlasiQ9XUT4

Expressioni

Gene expression databases

BgeeiWBGene00000641 Expressed in 5 organ(s), highest expression level in material anatomical entity

Interactioni

Protein-protein interaction databases

STRINGi6239.K08C9.4

Structurei

3D structure databases

ProteinModelPortaliQ9XUT4
SMRiQ9XUT4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 56Col_cuticle_NInterPro annotationAdd BLAST53

Keywords - Domaini

CollagenImported

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00910000144430
HOGENOMiHOG000085656
InParanoidiQ9XUT4
OMAiSLYFDVM
OrthoDBiEOG091G0PZU
PhylomeDBiQ9XUT4

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit

Sequencei

Sequence statusi: Complete.

Q9XUT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRFLAGTLS AISGIVILGS LVIAGVLFND INTLYFDVMD DMHEFKLLAD
60 70 80 90 100
DAWNKMITVE HNAPNTLDSL FKRGKRQSGS SCNCGPQPSN CPAGPAGPPG
110 120 130 140 150
EPGQPGDDGA PGKAGDNGHD GIPSPIDAYA QHDCIKCPAG APGPAGPDGE
160 170 180 190 200
AGAPGPDGQP GQDGPAGIDG APGEAGPQGD AGAAGQDGEA GAPGPAGKNG
210 220 230 240 250
QRGQGAPGPQ GPEGPAGAAG QDGAPGEDGA PGAQGTEGIA GAPGKDGETG
260 270 280 290 300
PDGAAGEAGG EGAPGPDAAY CPCPPRTVGY GEVDQPQAEQ SGYRRRAARR

L
Length:301
Mass (Da):29,219
Last modified:November 1, 1999 - v1
Checksum:iFAA33106DB313826
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAB04587.1
PIRiT23441
RefSeqiNP_492936.1, NM_060535.1
UniGeneiCel.18475

Genome annotation databases

EnsemblMetazoaiK08C9.4; K08C9.4; WBGene00000641
GeneIDi187138
KEGGicel:CELE_K08C9.4
UCSCiK08C9.4 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAB04587.1
PIRiT23441
RefSeqiNP_492936.1, NM_060535.1
UniGeneiCel.18475

3D structure databases

ProteinModelPortaliQ9XUT4
SMRiQ9XUT4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.K08C9.4

Proteomic databases

EPDiQ9XUT4
PaxDbiQ9XUT4
PeptideAtlasiQ9XUT4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiK08C9.4; K08C9.4; WBGene00000641
GeneIDi187138
KEGGicel:CELE_K08C9.4
UCSCiK08C9.4 c. elegans

Organism-specific databases

CTDi187138
WormBaseiK08C9.4 ; CE18860 ; WBGene00000641 ; col-65

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00910000144430
HOGENOMiHOG000085656
InParanoidiQ9XUT4
OMAiSLYFDVM
OrthoDBiEOG091G0PZU
PhylomeDBiQ9XUT4

Gene expression databases

BgeeiWBGene00000641 Expressed in 5 organ(s), highest expression level in material anatomical entity

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XUT4_CAEEL
AccessioniPrimary (citable) accession number: Q9XUT4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: September 12, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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