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Protein
Submitted name:

F23M19.10

Gene

At1g34220

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-ATH-6798695 Neutrophil degranulation

Names & Taxonomyi

Protein namesi
Submitted name:
F23M19.10Imported
Submitted name:
Regulator of Vps4 activity in the MVB pathway proteinImported
Gene namesi
Ordered Locus Names:At1g34220Imported
ORF Names:F23M19.10Imported, F23M19_10Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G34220

Expressioni

Gene expression databases

ExpressionAtlasiQ9XIC8 baseline and differential

Structurei

3D structure databases

SMRiQ9XIC8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili32 – 59Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2027 Eukaryota
ENOG410YG52 LUCA
HOGENOMiHOG000242612

Family and domain databases

InterProiView protein in InterPro
IPR005061 Ist1
PANTHERiPTHR12161 PTHR12161, 1 hit
PfamiView protein in Pfam
PF03398 Ist1, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9XIC8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL
60 70 80 90 100
ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
110 120 130 140 150
DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV
160 170 180 190 200
NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
210 220 230 240 250
DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN
260 270 280 290 300
VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
310 320 330 340 350
AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR
360 370 380 390 400
KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
410 420 430 440 450
PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN
460 470 480 490 500
QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
510 520 530 540 550
DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS
560 570 580 590 600
SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
610
DPSSGSHSFS DNTRPAHDS
Length:619
Mass (Da):68,959
Last modified:November 1, 1999 - v1
Checksum:iF6FCC3FCC706B31F
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4HUX0F4HUX0_ARATH
Regulator of Vps4 activity in the M...
At1g34220, F23M19.10, F23M19_10
649Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007454 Genomic DNA Translation: AAD39610.1
CP002684 Genomic DNA Translation: AEE31688.1
PIRiE86466
RefSeqiNP_973961.1, NM_202232.2
UniGeneiAt.11393
At.48266

Genome annotation databases

EnsemblPlantsiAT1G34220.2; AT1G34220.2; AT1G34220
GeneIDi840321
GrameneiAT1G34220.2; AT1G34220.2; AT1G34220

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007454 Genomic DNA Translation: AAD39610.1
CP002684 Genomic DNA Translation: AEE31688.1
PIRiE86466
RefSeqiNP_973961.1, NM_202232.2
UniGeneiAt.11393
At.48266

3D structure databases

SMRiQ9XIC8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G34220.2; AT1G34220.2; AT1G34220
GeneIDi840321
GrameneiAT1G34220.2; AT1G34220.2; AT1G34220

Organism-specific databases

AraportiAT1G34220

Phylogenomic databases

eggNOGiKOG2027 Eukaryota
ENOG410YG52 LUCA
HOGENOMiHOG000242612

Enzyme and pathway databases

ReactomeiR-ATH-6798695 Neutrophil degranulation

Gene expression databases

ExpressionAtlasiQ9XIC8 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR005061 Ist1
PANTHERiPTHR12161 PTHR12161, 1 hit
PfamiView protein in Pfam
PF03398 Ist1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XIC8_ARATH
AccessioniPrimary (citable) accession number: Q9XIC8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: October 10, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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