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Protein

Fucosyltransferase 6

Gene

FUT6

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May be involved in cell wall biosynthesis. May act as a fucosyltransferase.

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCell wall biogenesis/degradation

Enzyme and pathway databases

BioCyciARA:AT1G14080-MONOMER
UniPathwayi
UPA00378

Protein family/group databases

CAZyiGT37 Glycosyltransferase Family 37

Names & Taxonomyi

Protein namesi
Recommended name:
Fucosyltransferase 6 (EC:2.4.1.-)
Short name:
AtFUT6
Gene namesi
Name:FUT6
Ordered Locus Names:At1g14080
ORF Names:F16A14.28, F7A19.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G14080

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 20CytoplasmicSequence analysisAdd BLAST20
Transmembranei21 – 41Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST21
Topological domaini42 – 537LumenalSequence analysisAdd BLAST496

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001939151 – 537Fucosyltransferase 6Add BLAST537

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi54N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi231N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi378N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9XI80

Expressioni

Tissue specificityi

Expressed in roots and flowers.1 Publication

Gene expression databases

ExpressionAtlasiQ9XI80 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G14080.1

Structurei

3D structure databases

ProteinModelPortaliQ9XI80
SMRiQ9XI80
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 37 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410II80 Eukaryota
ENOG410XXHE LUCA
HOGENOMiHOG000239522
InParanoidiQ9XI80
KOiK13681
OMAiDNAGYFQ
PhylomeDBiQ9XI80

Family and domain databases

InterProiView protein in InterPro
IPR004938 XG_FTase
PANTHERiPTHR31889 PTHR31889, 1 hit
PfamiView protein in Pfam
PF03254 XG_FTase, 1 hit

Sequencei

Sequence statusi: Complete.

Q9XI80-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MYHIFQISSE VFRAFGLKMK ILLTLVFSGL LIWSVVLVSF SNDFNNQLLV
60 70 80 90 100
ATSNVSRESE TPRDRLIGGL LTADFDEGSC LSRYQQSLLY RKASPYKPSE
110 120 130 140 150
YLVSKLRSYE KLHKRCGPGT DAYKKATEIL GHDDENYASK SVGECRYIVW
160 170 180 190 200
VAVYGLGNRI LTLASVFLYA LLTERVVLVD QSKDISDLFC EPFPGTSWLL
210 220 230 240 250
PLEFPLMKQI DGYNKGYSRC YGTMLNNQAI NSTLIPPHLY LHILHDSRDN
260 270 280 290 300
DKMFFCQKDQ SLVDKVPWLI VKANVYFVPS LWLNPTFQTE LMKLFPQKEA
310 320 330 340 350
VFHHLARYLF HPTNQVWGLI TRSYNAYLSR ADETLGIQIR VFSDRAGYFQ
360 370 380 390 400
HVMDQVVACT RRENLLPEPA AQEEPKVNIS RSQKLKAVLV TSLYPEYSET
410 420 430 440 450
LKNMYWERPS STGEIIEVYQ PSGERVQQTD KKLHDQKALA EMYLLSLTDK
460 470 480 490 500
IVTSARSTFG YVAHSLGGLK PWLLYQPTGP TAPDPPCIQS TSMDPCHLTP
510 520 530
PSHGCEPEWG TNSGKVVPFV RHCEDRGNDG LKLFDEL
Length:537
Mass (Da):61,191
Last modified:November 1, 1999 - v1
Checksum:i25DA4756D4394EA2
GO

Sequence cautioni

The sequence AAF79408 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAO00849 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AAP68320 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007576 Genomic DNA Translation: AAD39293.1
AC068197 Genomic DNA Translation: AAF79408.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29105.2
BT002489 mRNA Translation: AAO00849.1 Different initiation.
BT008881 mRNA Translation: AAP68320.1 Different initiation.
PIRiB86274
RefSeqiNP_172860.2, NM_101273.3
UniGeneiAt.41992

Genome annotation databases

EnsemblPlantsiAT1G14080.1; AT1G14080.1; AT1G14080
GeneIDi837968
GrameneiAT1G14080.1; AT1G14080.1; AT1G14080
KEGGiath:AT1G14080

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007576 Genomic DNA Translation: AAD39293.1
AC068197 Genomic DNA Translation: AAF79408.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29105.2
BT002489 mRNA Translation: AAO00849.1 Different initiation.
BT008881 mRNA Translation: AAP68320.1 Different initiation.
PIRiB86274
RefSeqiNP_172860.2, NM_101273.3
UniGeneiAt.41992

3D structure databases

ProteinModelPortaliQ9XI80
SMRiQ9XI80
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G14080.1

Protein family/group databases

CAZyiGT37 Glycosyltransferase Family 37

Proteomic databases

PaxDbiQ9XI80

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G14080.1; AT1G14080.1; AT1G14080
GeneIDi837968
GrameneiAT1G14080.1; AT1G14080.1; AT1G14080
KEGGiath:AT1G14080

Organism-specific databases

AraportiAT1G14080

Phylogenomic databases

eggNOGiENOG410II80 Eukaryota
ENOG410XXHE LUCA
HOGENOMiHOG000239522
InParanoidiQ9XI80
KOiK13681
OMAiDNAGYFQ
PhylomeDBiQ9XI80

Enzyme and pathway databases

UniPathwayi
UPA00378

BioCyciARA:AT1G14080-MONOMER

Miscellaneous databases

PROiPR:Q9XI80

Gene expression databases

ExpressionAtlasiQ9XI80 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR004938 XG_FTase
PANTHERiPTHR31889 PTHR31889, 1 hit
PfamiView protein in Pfam
PF03254 XG_FTase, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiFUT6_ARATH
AccessioniPrimary (citable) accession number: Q9XI80
Secondary accession number(s): F4HUF1, Q8GUI5, Q9LMF2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: November 1, 1999
Last modified: November 7, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  3. PATHWAY comments
    Index of metabolic and biosynthesis pathways
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Main funding by: National Institutes of Health

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