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Entry version 123 (02 Jun 2021)
Sequence version 1 (01 Nov 1999)
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Protein

Protein OSCA1

Gene

OSCA1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as a hyperosmolarity-gated non-selective cation channel that permeates Ca2+ ions (PubMed:25162526, PubMed:30190597).

Shows the following permeability sequence: K+ > Ba2+ = Ca2+ > Na+ = Mg2+ = Cs+ (PubMed:25162526).

Mechanosensitive ion channel that converts mechanical stimuli into a flow of ions (PubMed:30190597).

2 Publications

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes regulatory mechanisms for enzymes, transporters or microbial transcription factors, and reports the components which regulate (by activation or inhibition) the reaction.<p><a href='/help/activity_regulation' target='_top'>More...</a></p>Activity regulationi

Activated by mechanical pressure.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionIon channel
Biological processIon transport, Transport
LigandCalcium

Protein family/group databases

Transport Classification Database

More...
TCDBi
1.A.17.5.19, the calcium-dependent chloride channel (ca-clc) family

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein OSCA11 Publication
Alternative name(s):
CSC1-like protein At4g04340Curated
Hyperosmolality-gated Ca2+ permeable channel 1.11 Publication
Short name:
AtOSCA1.11 Publication
Protein reduced hyperosmolality-induced [Ca(2+)]i increase 11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:OSCA11 Publication
Synonyms:OSCA1.11 Publication
Ordered Locus Names:At4g04340Imported
ORF Names:T19B17.6Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT4G04340

The Arabidopsis Information Resource

More...
TAIRi
locus:2134882, AT4G04340

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 5Extracellular1 Publication5
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei6 – 26HelicalSequence analysisAdd BLAST21
Topological domaini27 – 98Cytoplasmic1 PublicationAdd BLAST72
Transmembranei99 – 119HelicalSequence analysisAdd BLAST21
Topological domaini120 – 158Extracellular1 PublicationAdd BLAST39
Transmembranei159 – 179HelicalSequence analysisAdd BLAST21
Topological domaini180 – 375Cytoplasmic1 PublicationAdd BLAST196
Transmembranei376 – 396HelicalSequence analysisAdd BLAST21
Topological domaini397 – 424Extracellular1 PublicationAdd BLAST28
Transmembranei425 – 445HelicalSequence analysisAdd BLAST21
Topological domaini446 – 465Cytoplasmic1 PublicationAdd BLAST20
Transmembranei466 – 486HelicalSequence analysisAdd BLAST21
Topological domaini487 – 527Extracellular1 PublicationAdd BLAST41
Transmembranei528 – 548HelicalSequence analysisAdd BLAST21
Topological domaini549 – 568Cytoplasmic1 PublicationAdd BLAST20
Transmembranei569 – 589HelicalSequence analysisAdd BLAST21
Topological domaini590 – 592Extracellular1 Publication3
Transmembranei593 – 613HelicalSequence analysisAdd BLAST21
Topological domaini614 – 625Cytoplasmic1 PublicationAdd BLAST12
Transmembranei626 – 646HelicalSequence analysisAdd BLAST21
Topological domaini647 – 655Extracellular1 Publication9
Transmembranei656 – 676HelicalSequence analysisAdd BLAST21
Topological domaini677 – 772Cytoplasmic1 PublicationAdd BLAST96

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Impaired osmotic Ca2+ signaling in guard cells and root cells, and attenuated water transpiration regulation and root growth in response to osmotic stress.1 Publication

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi59G → R in osca1-1; defect in the perception of hyperosmolarity; when associated with D-507. 1 Publication1
Mutagenesisi124N → Q: No effect on the molecular weight of OSCA1 when overexpressed in a heterologous system. 1 Publication1
Mutagenesisi138N → Q: Decreases the molecular weight of OSCA1 when overexpressed in a heterologous system. 1 Publication1
Mutagenesisi339Q → A: Slightly prevents the formation of homodimer. 1 Publication1
Mutagenesisi340T → A: Prevents the formation of homodimer. 1 Publication1
Mutagenesisi507G → D in osca1-1; defect in the perception of hyperosmolarity; when associated with R-59. 1 Publication1
Mutagenesisi688E → A: Prevents the formation of homodimer. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004298031 – 772Protein OSCA1Add BLAST772

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi138N-linked (GlcNAc) asparagine1 Publication1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9XEA1

PRoteomics IDEntifications database

More...
PRIDEi
Q9XEA1

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
220348

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9XEA1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in leaves, flowers, roots and guard cells.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9XEA1, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9XEA1, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer.

1 Publication

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3702.AT4G04340.3

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1772
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9XEA1

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni339 – 344Cytoplasmic region required for homodimerization1 Publication6
Regioni686 – 688Cytoplasmic region required for homodimerization1 Publication3
Regioni743 – 772DisorderedSequence analysisAdd BLAST30

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi743 – 764Polar residuesSequence analysisAdd BLAST22

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1134, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002458_7_1_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9XEA1

Identification of Orthologs from Complete Genome Data

More...
OMAi
WTNNELE

Database of Orthologous Groups

More...
OrthoDBi
395194at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9XEA1

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR032880, Csc1_N
IPR027815, PHM7_cyt
IPR003864, RSN1_7TM

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14703, PHM7_cyt, 1 hit
PF02714, RSN1_7TM, 1 hit
PF13967, RSN1_TM, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9XEA1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATLKDIGVS AGINILTAFI FFIIFAFLRL QPFNDRVYFS KWYLRGLRSS
60 70 80 90 100
PASGGGFAGR FVNLELRSYL KFLHWMPEAL KMPERELIDH AGLDSVVYLR
110 120 130 140 150
IYWLGLKIFA PIAMLAWAVL VPVNWTNNEL ELAKHFKNVT SSDIDKLTIS
160 170 180 190 200
NIPEGSNRFW AHIIMAYAFT IWTCYMLMKE YETVANMRLQ FLASEGRRPD
210 220 230 240 250
QFTVLVRNVP PDPDETVSEL VEHFFLVNHP DNYLTHQVVC NANKLADLVS
260 270 280 290 300
KKTKLQNWLD YYQLKYTRNN SQIRPITKLG CLGLCGQKVD AIEHYIAEVD
310 320 330 340 350
KTSKEIAEER ENVVNDQKSV MPASFVSFKT RWAAAVCAQT TQTRNPTEWL
360 370 380 390 400
TEWAAEPRDI YWPNLAIPYV SLTVRRLVMN VAFFFLTFFF IIPIAFVQSL
410 420 430 440 450
ATIEGIEKVA PFLKVIIEKD FIKSLIQGLL AGIALKLFLI FLPAILMTMS
460 470 480 490 500
KFEGFTSVSF LERRSASRYY IFNLVNVFLG SVIAGAAFEQ LNSFLNQSPN
510 520 530 540 550
QIPKTIGMAI PMKATFFITY IMVDGWAGVA GEILMLKPLI IYHLKNAFLV
560 570 580 590 600
KTEKDREEAM NPGSIGFNTG EPQIQLYFLL GLVYAPVTPM LLPFILVFFA
610 620 630 640 650
LAYVVYRHQI INVYNQEYES AAAFWPDVHG RVITALIISQ LLLMGLLGTK
660 670 680 690 700
HAASAAPFLI ALPVITIGFH RFCKGRFEPA FVRYPLQEAM MKDTLERARE
710 720 730 740 750
PNLNLKGYLQ DAYIHPVFKG GDNDDDGDMI GKLENEVIIV PTKRQSRRNT
760 770
PAPSRISGES SPSLAVINGK EV
Length:772
Mass (Da):87,607
Last modified:November 1, 1999 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i51786B50068D96AB
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti667I → T in AAL07154 (PubMed:14593172).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KJ920356 mRNA Translation: AIU34613.1
AF069441 Genomic DNA Translation: AAD36947.1
AL161500 Genomic DNA Translation: CAB77902.1
CP002687 Genomic DNA Translation: AEE82380.1
CP002687 Genomic DNA Translation: AEE82381.1
CP002687 Genomic DNA Translation: AEE82382.1
AY056305 mRNA Translation: AAL07154.1
AY093209 mRNA Translation: AAM13208.1

Protein sequence database of the Protein Information Resource

More...
PIRi
H85054

NCBI Reference Sequences

More...
RefSeqi
NP_192343.1, NM_116672.4
NP_849296.1, NM_178965.2
NP_849297.1, NM_178966.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT4G04340.1; AT4G04340.1; AT4G04340
AT4G04340.2; AT4G04340.2; AT4G04340
AT4G04340.3; AT4G04340.3; AT4G04340

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
825754

Gramene; a comparative resource for plants

More...
Gramenei
AT4G04340.1; AT4G04340.1; AT4G04340
AT4G04340.2; AT4G04340.2; AT4G04340
AT4G04340.3; AT4G04340.3; AT4G04340

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT4G04340

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ920356 mRNA Translation: AIU34613.1
AF069441 Genomic DNA Translation: AAD36947.1
AL161500 Genomic DNA Translation: CAB77902.1
CP002687 Genomic DNA Translation: AEE82380.1
CP002687 Genomic DNA Translation: AEE82381.1
CP002687 Genomic DNA Translation: AEE82382.1
AY056305 mRNA Translation: AAL07154.1
AY093209 mRNA Translation: AAM13208.1
PIRiH85054
RefSeqiNP_192343.1, NM_116672.4
NP_849296.1, NM_178965.2
NP_849297.1, NM_178966.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
6JPFelectron microscopy3.52A/B1-772[»]
SMRiQ9XEA1
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G04340.3

Protein family/group databases

TCDBi1.A.17.5.19, the calcium-dependent chloride channel (ca-clc) family

PTM databases

iPTMnetiQ9XEA1

Proteomic databases

PaxDbiQ9XEA1
PRIDEiQ9XEA1
ProteomicsDBi220348

Genome annotation databases

EnsemblPlantsiAT4G04340.1; AT4G04340.1; AT4G04340
AT4G04340.2; AT4G04340.2; AT4G04340
AT4G04340.3; AT4G04340.3; AT4G04340
GeneIDi825754
GrameneiAT4G04340.1; AT4G04340.1; AT4G04340
AT4G04340.2; AT4G04340.2; AT4G04340
AT4G04340.3; AT4G04340.3; AT4G04340
KEGGiath:AT4G04340

Organism-specific databases

AraportiAT4G04340
TAIRilocus:2134882, AT4G04340

Phylogenomic databases

eggNOGiKOG1134, Eukaryota
HOGENOMiCLU_002458_7_1_1
InParanoidiQ9XEA1
OMAiWTNNELE
OrthoDBi395194at2759
PhylomeDBiQ9XEA1

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9XEA1

Gene expression databases

ExpressionAtlasiQ9XEA1, baseline and differential
GenevisibleiQ9XEA1, AT

Family and domain databases

InterProiView protein in InterPro
IPR032880, Csc1_N
IPR027815, PHM7_cyt
IPR003864, RSN1_7TM
PfamiView protein in Pfam
PF14703, PHM7_cyt, 1 hit
PF02714, RSN1_7TM, 1 hit
PF13967, RSN1_TM, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCSCL5_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9XEA1
Secondary accession number(s): A0A097NUN6, Q93ZR7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 9, 2014
Last sequence update: November 1, 1999
Last modified: June 2, 2021
This is version 123 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
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