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Entry version 165 (16 Oct 2019)
Sequence version 3 (27 Jul 2011)
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Protein

Attractin

Gene

Atrn

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Involved in the initial immune cell clustering during inflammatory response and may regulate chemotactic activity of chemokines (By similarity). May play a role in melanocortin signaling pathways that regulate energy homeostasis and hair color. Low-affinity receptor for agouti. Has a critical role in normal myelination in the central nervous system (By similarity).By similarity1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionReceptor
Biological processInflammatory response
LigandLectin

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Attractin
Alternative name(s):
Protein mahogany
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Atrn
Synonyms:Mg, Mgca
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1341628 Atrn

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini83 – 1278ExtracellularSequence analysisAdd BLAST1196
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei1279 – 1299HelicalSequence analysisAdd BLAST21
Topological domaini1300 – 1428CytoplasmicSequence analysisAdd BLAST129

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes a propeptide, which is a part of a protein that is cleaved during maturation or activation. Once cleaved, a propeptide generally has no independent biological function.<p><a href='/help/propep' target='_top'>More...</a></p>PropeptideiPRO_000039477223 – 82By similarityAdd BLAST60
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000000748483 – 1428AttractinAdd BLAST1346

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi100 ↔ 110By similarity
Disulfide bondi104 ↔ 117By similarity
Disulfide bondi119 ↔ 128By similarity
Disulfide bondi131 ↔ 157By similarity
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi212N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi236N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi241N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi249 ↔ 259By similarity
Glycosylationi252N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi253 ↔ 270By similarity
Glycosylationi263N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi272 ↔ 281By similarity
Glycosylationi299N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi324N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi361N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi382N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi415N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi427N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi574N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi622N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi730N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi815 ↔ 917By similarity
Glycosylationi862N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi913N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi922N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi985N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1042N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1053N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1062 ↔ 1070By similarity
Disulfide bondi1064 ↔ 1076By similarity
Glycosylationi1072N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi1079 ↔ 1088By similarity
Disulfide bondi1091 ↔ 1105By similarity
Disulfide bondi1108 ↔ 1117By similarity
Disulfide bondi1110 ↔ 1124By similarity
Disulfide bondi1126 ↔ 1136By similarity
Disulfide bondi1139 ↔ 1154By similarity
Glycosylationi1197N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1205N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1249N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1258N-linked (GlcNAc...) asparagineSequence analysis1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Heavily glycosylated.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q9WU60

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9WU60

PRoteomics IDEntifications database

More...
PRIDEi
Q9WU60

PTM databases

GlyConnect protein glycosylation platform

More...
GlyConnecti
2145

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9WU60

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9WU60

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q9WU60

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000027312 Expressed in 248 organ(s), highest expression level in urinary bladder urothelium

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9WU60 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Monomer and homotrimer.

By similarity

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000028781

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini100 – 128EGF-likePROSITE-ProRule annotationAdd BLAST29
Domaini131 – 247CUBPROSITE-ProRule annotationAdd BLAST117
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati351 – 401Kelch 1Add BLAST51
Repeati402 – 450Kelch 2Add BLAST49
Repeati460 – 507Kelch 3Add BLAST48
Repeati512 – 563Kelch 4Add BLAST52
Repeati565 – 623Kelch 5Add BLAST59
Repeati624 – 670Kelch 6Add BLAST47
Domaini702 – 747PSI 1Add BLAST46
Domaini754 – 793PSI 2Add BLAST40
Domaini794 – 918C-type lectinPROSITE-ProRule annotationAdd BLAST125
Domaini931 – 982PSI 3Add BLAST52
Domaini985 – 1060PSI 4Add BLAST76
Domaini1062 – 1107Laminin EGF-like 1PROSITE-ProRule annotationAdd BLAST46
Domaini1108 – 1156Laminin EGF-like 2PROSITE-ProRule annotationAdd BLAST49

Keywords - Domaini

EGF-like domain, Kelch repeat, Laminin EGF-like domain, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1388 Eukaryota
ENOG410XRW4 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157346

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000231727

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9WU60

Identification of Orthologs from Complete Genome Data

More...
OMAi
SEWQGPG

Database of Orthologous Groups

More...
OrthoDBi
49565at2759

TreeFam database of animal gene trees

More...
TreeFami
TF321873

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00041 CUB, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.120.10.80, 2 hits
2.60.120.290, 1 hit
3.10.100.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR000859 CUB_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR011043 Gal_Oxase/kelch_b-propeller
IPR015915 Kelch-typ_b-propeller
IPR006652 Kelch_1
IPR002049 Laminin_EGF
IPR002165 Plexin_repeat
IPR016201 PSI
IPR035914 Sperma_CUB_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00431 CUB, 1 hit
PF01344 Kelch_1, 2 hits
PF00059 Lectin_C, 1 hit
PF01437 PSI, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00034 CLECT, 1 hit
SM00042 CUB, 1 hit
SM00181 EGF, 3 hits
SM00180 EGF_Lam, 2 hits
SM00423 PSI, 5 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49854 SSF49854, 1 hit
SSF50965 SSF50965, 1 hit
SSF56436 SSF56436, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit
PS01180 CUB, 1 hit
PS00022 EGF_1, 3 hits
PS01186 EGF_2, 1 hit
PS50026 EGF_3, 2 hits
PS01248 EGF_LAM_1, 1 hit
PS50027 EGF_LAM_2, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q9WU60-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVAVAAAAAT EARLRGSTTA TAAPAGRKGR QHRPCTATGA WRPGPRARLC
60 70 80 90 100
LPRVLSRALP PPPLLPLLFS LLLLPLPREA EAAAVAAAVS GSAAAEAKEC
110 120 130 140 150
DRPCVNGGRC NPGTGQCVCP TGWVGEQCQH CGGRFRLTGS SGFVTDGPGN
160 170 180 190 200
YKYKTKCTWL IEGQPNRIMR LRFNHFATEC SWDHLYVYDG DSIYAPLIAA
210 220 230 240 250
FSGLIVPERD GNETAPEVTV TSGYALLHFF SDAAYNLTGF NITYNFDMCP
260 270 280 290 300
NNCSGRGECK SSNSSSAVEC ECSENWKGES CDIPHCTDNC GFPHRGICNA
310 320 330 340 350
SDTRGCSCFP HWQGPGCSIP VPANQSFWTR EEYSDLKLPR ASHKAVVNGN
360 370 380 390 400
IMWVVGGYMF NHSDYSMVLA YDLTSREWLP LNHSVNSVVV RYGHSLALHK
410 420 430 440 450
DKIYMYGGKI DSTGNVTNEL RVFHIHNESW VLLTPKAKDQ YAVVGHSAHI
460 470 480 490 500
VTLASGRVVM LVIFGHCPLY GYISVVQEYD LEKNTWSILH TQGALVQGGY
510 520 530 540 550
GHSSVYDDRT KALYVHGGYK AFSANKYRLA DDLYRYDVDT QMWTILKDSR
560 570 580 590 600
FFRYLHTAVI VSGTMLVFGG NTHNDTSMSH GAKCFSSDFM AYDIACDRWS
610 620 630 640 650
VLPRPELHHD VNRFGHSAVL YNSTMYVFGG FNSLLLSDVL VFTSEQCDAH
660 670 680 690 700
RSEAACVAAG PGIRCLWDTQ SSRCTSWELA TEEQAEKLKS ECFSKRTLDH
710 720 730 740 750
DRCDQHTDCY SCTANTNDCH WCNDHCVPVN HSCTEGQISI AKYESCPKDN
760 770 780 790 800
PMYYCNKKTS CRSCALDQNC QWEPRNQECI ALPENICGNG WHLVGNSCLK
810 820 830 840 850
ITTAKENYDN AKLSCRNHNA FLASLTSQKK VEFVLKQLRL MQSSQSMSKL
860 870 880 890 900
TLTPWVGLRK INVSYWCWED MSPFTNSLLQ WMPSEPSDAG FCGILSEPST
910 920 930 940 950
RGLKAATCIN PLNGSVCERP ANHSAKQCRT PCALRTACGE CTSSSSECMW
960 970 980 990 1000
CSNMKQCVDS NAYVASFPFG QCMEWYTMSS CPPENCSGYC TCSHCLEQPG
1010 1020 1030 1040 1050
CGWCTDPSNT GKGKCIEGSY KGPVKMPSQA SAGNVYPQPL LNSSMCLEDS
1060 1070 1080 1090 1100
RYNWSFIHCP ACQCNGHSKC INQSICEKCE DLTTGKHCET CISGFYGDPT
1110 1120 1130 1140 1150
NGGKCQPCKC NGHASLCNTN TGKCFCTTKG VKGDECQLCE VENRYQGNPL
1160 1170 1180 1190 1200
KGTCYYTLLI DYQFTFSLSQ EDDRYYTAIN FVATPDEQNR DLDMFINASK
1210 1220 1230 1240 1250
NFNLNITWAT SFPAGTQTGE EVPVVSKTNI KEYKDSFSNE KFDFRNHPNI
1260 1270 1280 1290 1300
TFFVYVSNFT WPIKIQIAFS QHSNFMDLVQ FFVTFFSCFL SLLLVAAVVW
1310 1320 1330 1340 1350
KIKQSCWASR RREQLLREMQ QMASRPFASV NVALETDEEP PDLIGGSIKT
1360 1370 1380 1390 1400
VPKPIALEPC FGNKAAVLSV FVRLPRGLGG IPPPGQSGLA VASALVDISQ
1410 1420
QMPIVYKEKS GAVRNRKQQP PAQPGTCI
Length:1,428
Mass (Da):158,058
Last modified:July 27, 2011 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iBB54C24E7EF1CE34
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAD20947 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti6A → V in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti9A → S in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti20A → T in AAD20947 (PubMed:10086355).Curated1
Sequence conflicti164 – 169QPNRIM → YPNAVL in AAD25372 (PubMed:10086356).Curated6
Sequence conflicti255G → A in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti505V → A in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti833F → L in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti1075I → V in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti1140E → K in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti1171E → G in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti1192L → F in AAD25372 (PubMed:10086356).Curated1
Sequence conflicti1201N → K in AAD25372 (PubMed:10086356).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF116897 mRNA Translation: AAD20947.1 Frameshift.
AF119821 mRNA Translation: AAD25372.1
AH007542 Genomic DNA Translation: AAD22476.1
AL833771 Genomic DNA No translation available.
CH466519 Genomic DNA Translation: EDL28292.1

The Consensus CDS (CCDS) project

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CCDSi
CCDS16751.1

NCBI Reference Sequences

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RefSeqi
NP_033860.2, NM_009730.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000028781; ENSMUSP00000028781; ENSMUSG00000027312

Database of genes from NCBI RefSeq genomes

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GeneIDi
11990

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
mmu:11990

UCSC genome browser

More...
UCSCi
uc008mkc.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross_references_section">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

Functional Glycomics Gateway - Glycan Binding

Attractin

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF116897 mRNA Translation: AAD20947.1 Frameshift.
AF119821 mRNA Translation: AAD25372.1
AH007542 Genomic DNA Translation: AAD22476.1
AL833771 Genomic DNA No translation available.
CH466519 Genomic DNA Translation: EDL28292.1
CCDSiCCDS16751.1
RefSeqiNP_033860.2, NM_009730.3

3D structure databases

Database of comparative protein structure models

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ModBasei
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SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000028781

PTM databases

GlyConnecti2145
iPTMnetiQ9WU60
PhosphoSitePlusiQ9WU60
SwissPalmiQ9WU60

Proteomic databases

MaxQBiQ9WU60
PaxDbiQ9WU60
PRIDEiQ9WU60

Genome annotation databases

EnsembliENSMUST00000028781; ENSMUSP00000028781; ENSMUSG00000027312
GeneIDi11990
KEGGimmu:11990
UCSCiuc008mkc.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
8455
MGIiMGI:1341628 Atrn

Phylogenomic databases

eggNOGiKOG1388 Eukaryota
ENOG410XRW4 LUCA
GeneTreeiENSGT00940000157346
HOGENOMiHOG000231727
InParanoidiQ9WU60
OMAiSEWQGPG
OrthoDBi49565at2759
TreeFamiTF321873

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Atrn mouse

Protein Ontology

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PROi
PR:Q9WU60

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000027312 Expressed in 248 organ(s), highest expression level in urinary bladder urothelium
GenevisibleiQ9WU60 MM

Family and domain databases

CDDicd00041 CUB, 1 hit
Gene3Di2.120.10.80, 2 hits
2.60.120.290, 1 hit
3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
IPR000859 CUB_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR011043 Gal_Oxase/kelch_b-propeller
IPR015915 Kelch-typ_b-propeller
IPR006652 Kelch_1
IPR002049 Laminin_EGF
IPR002165 Plexin_repeat
IPR016201 PSI
IPR035914 Sperma_CUB_dom_sf
PfamiView protein in Pfam
PF00431 CUB, 1 hit
PF01344 Kelch_1, 2 hits
PF00059 Lectin_C, 1 hit
PF01437 PSI, 2 hits
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SM00042 CUB, 1 hit
SM00181 EGF, 3 hits
SM00180 EGF_Lam, 2 hits
SM00423 PSI, 5 hits
SUPFAMiSSF49854 SSF49854, 1 hit
SSF50965 SSF50965, 1 hit
SSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS50041 C_TYPE_LECTIN_2, 1 hit
PS01180 CUB, 1 hit
PS00022 EGF_1, 3 hits
PS01186 EGF_2, 1 hit
PS50026 EGF_3, 2 hits
PS01248 EGF_LAM_1, 1 hit
PS50027 EGF_LAM_2, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiATRN_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9WU60
Secondary accession number(s): A2AP43, Q9R263, Q9WU77
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: July 27, 2011
Last modified: October 16, 2019
This is version 165 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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