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Protein

40S ribosomal protein S10b

Gene

RpS10b

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cytoplasmic translation Source: FlyBase
  • ribosomal small subunit assembly Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DME-72649 Translation initiation complex formation
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-DME-72702 Ribosomal scanning and start codon recognition
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S10b
Gene namesi
Name:RpS10b
Synonyms:RpS10
ORF Names:CG14206
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0285947 RpS10b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001163671 – 16040S ribosomal protein S10bAdd BLAST160

Proteomic databases

PaxDbiQ9VWG3
PRIDEiQ9VWG3

Expressioni

Gene expression databases

BgeeiFBgn0261593
ExpressionAtlasiQ9VWG3 differential
GenevisibleiQ9VWG3 DM

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
stumpsO967573EBI-75824,EBI-74922

Protein-protein interaction databases

BioGridi59253, 64 interactors
IntActiQ9VWG3, 22 interactors
STRINGi7227.FBpp0074500

Structurei

3D structure databases

ProteinModelPortaliQ9VWG3
SMRiQ9VWG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3344 Eukaryota
COG5045 LUCA
GeneTreeiENSGT00440000034918
InParanoidiQ9VWG3
KOiK02947
OMAiQMLMPKK
OrthoDBiEOG091G0QTW
PhylomeDBiQ9VWG3

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR037447 Rps10
IPR005326 S10_plectin_N
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR12146 PTHR12146, 1 hit
PfamiView protein in Pfam
PF03501 S10_plectin, 1 hit

Sequencei

Sequence statusi: Complete.

Q9VWG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFMPKAHRVA IYEYLFKEGV IVAKKDFHAQ KHPELESIPN LHVIKAMQSL
60 70 80 90 100
HSRGLVKEQF AWRHYYWYLT NEGIEELRSY LHLPPEIVPS TLKRPARSET
110 120 130 140 150
VRPRPAVGGP RGPGDASKTG EDRSAYRRAP GGSGVDKKGD VGPGAGEVEF
160
RGGFGRGSRN
Length:160
Mass (Da):17,878
Last modified:October 1, 2002 - v2
Checksum:i5955BD98D664FD07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA Translation: AAF48978.2
AE014298 Genomic DNA Translation: AAN09507.1
AY070896 mRNA Translation: AAL48518.1
RefSeqiNP_001245758.1, NM_001258829.2
NP_001285445.1, NM_001298516.1
NP_608324.1, NM_134480.4
NP_728273.1, NM_167668.2
UniGeneiDm.6225

Genome annotation databases

EnsemblMetazoaiFBtr0074731; FBpp0074500; FBgn0285947
FBtr0074732; FBpp0074501; FBgn0285947
FBtr0308192; FBpp0300512; FBgn0285947
FBtr0344339; FBpp0310720; FBgn0285947
GeneIDi32953
KEGGidme:Dmel_CG14206

Similar proteinsi

Entry informationi

Entry nameiRS10B_DROME
AccessioniPrimary (citable) accession number: Q9VWG3
Secondary accession number(s): A4V4S6, Q8SZG7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 25, 2004
Last sequence update: October 1, 2002
Last modified: July 18, 2018
This is version 122 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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