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Protein

39S ribosomal protein L13, mitochondrial

Gene

mRpL13

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • mitochondrial translation Source: FlyBase
  • translation Source: FlyBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-5389840 Mitochondrial translation elongation
R-DME-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L13, mitochondrial
Short name:
L13mt
Short name:
MRP-L13
Gene namesi
Name:mRpL13
ORF Names:CG10603
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0032720 mRpL13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001337951 – 17839S ribosomal protein L13, mitochondrialAdd BLAST178

Proteomic databases

PaxDbiQ9VJ38
PRIDEiQ9VJ38

Expressioni

Gene expression databases

BgeeiFBgn0032720
GenevisibleiQ9VJ38 DM

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins (By similarity).By similarity

Protein-protein interaction databases

IntActiQ9VJ38, 41 interactors
STRINGi7227.FBpp0088360

Structurei

3D structure databases

ProteinModelPortaliQ9VJ38
SMRiQ9VJ38
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3203 Eukaryota
COG0102 LUCA
GeneTreeiENSGT00390000001515
InParanoidiQ9VJ38
KOiK02871
OMAiVLMGKHK
OrthoDBiEOG091G0QCX
PhylomeDBiQ9VJ38

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit

Sequencei

Sequence statusi: Complete.

Q9VJ38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIAKRVQQW ATFARTWHIY DCTWQNPFES AKLVKTHLLG LQKPIYHPMN
60 70 80 90 100
DCGDHVVLIN TREIALPGDE WVKRVYFHHT GYPGGASWTL AWQLHEKDPT
110 120 130 140 150
MVMKKAVYNS MRGNLQRRHT MQRLHLFADD QVPEEILQNV TNQIRTPRSI
160 170
PQRLDHIDKE TLENFPNIMD YPKDYILR
Length:178
Mass (Da):21,090
Last modified:October 1, 2002 - v2
Checksum:i4F2E4FA6D12360C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014134 Genomic DNA Translation: AAF53719.2
BT053702 mRNA Translation: ACK77619.1
RefSeqiNP_523598.2, NM_078874.4
UniGeneiDm.2753

Genome annotation databases

EnsemblMetazoaiFBtr0089318; FBpp0088360; FBgn0032720
GeneIDi35145
KEGGidme:Dmel_CG10603

Similar proteinsi

Entry informationi

Entry nameiRM13_DROME
AccessioniPrimary (citable) accession number: Q9VJ38
Secondary accession number(s): B7FNL2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2003
Last sequence update: October 1, 2002
Last modified: May 23, 2018
This is version 127 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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